RNA–Protein interactions for RNA: ENST00000529993.5

LRP5-206, Transcript of LDL receptor related protein 5, humanhuman

TSL 1 (best)

Gene LRP5, Length 5,103 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP5-206ENST00000529993 CCDC43Q96MW1 224 aaKnown RBP17.54■□□□□ 0.4
LRP5-206ENST00000529993 FLT4P35916 1363 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 ZNF213O14771 459 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 SNRPA1P09661 255 aaKnown RBP17.53■□□□□ 0.4
LRP5-206ENST00000529993 GIMAP6Q6P9H5 292 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 PTPRTO14522 1441 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 CFAP100Q494V2 611 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 EPS15P42566 896 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 PPFIBP1Q86W92 1011 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 MAGEC2Q9UBF1 373 aaPredicted RBP17.53■□□□□ 0.4
LRP5-206ENST00000529993 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
LRP5-206ENST00000529993 RBM8AQ9Y5S9 174 aaKnown RBP17.53■□□□□ 0.4
LRP5-206ENST00000529993 GRM8O00222 908 aa17.52■□□□□ 0.4
LRP5-206ENST00000529993 SMARCE1Q969G3 411 aa17.52■□□□□ 0.4
LRP5-206ENST00000529993 BRF1Q92994 677 aa17.52■□□□□ 0.4
LRP5-206ENST00000529993 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
LRP5-206ENST00000529993 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.4
LRP5-206ENST00000529993 HSP90B2PQ58FF3 399 aa17.52■□□□□ 0.4
LRP5-206ENST00000529993 LDHAL6AQ6ZMR3 332 aa17.52■□□□□ 0.4
LRP5-206ENST00000529993 NOL7Q9UMY1 257 aaKnown RBP17.51■□□□□ 0.39
LRP5-206ENST00000529993 MSH6P52701 1360 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 ADCY5O95622 1261 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 ZSCAN22P10073 491 aaPredicted RBP17.51■□□□□ 0.39
LRP5-206ENST00000529993 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 CCDC144CPQ8IYA2 1237 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 FSIP1Q8NA03 581 aa17.51■□□□□ 0.39
LRP5-206ENST00000529993 BIN1O00499 593 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 CCP110O43303 1012 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 UBE2HP62256 183 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
LRP5-206ENST00000529993 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 USP48Q86UV5 1035 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 USP26Q9BXU7 913 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 DACH1Q9UI36 760 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 LMBR1LQ6UX01 489 aa17.5■□□□□ 0.39
LRP5-206ENST00000529993 KCNA6P17658 529 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 USP16Q9Y5T5 823 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 MAGI2Q86UL8 1455 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 ATP7AQ04656 1500 aa17.49■□□□□ 0.39
LRP5-206ENST00000529993 KLHL10Q6JEL2 608 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 CFAP65Q6ZU64 1925 aaKnown RBP17.48■□□□□ 0.39
LRP5-206ENST00000529993 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 ANAPC15P60006 121 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 LRSAM1Q6UWE0 723 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 NFATC2IPQ8NCF5 419 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 RUFY1Q96T51 708 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 ZHX3Q9H4I2 956 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 CLIP2Q9UDT6 1046 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 SMTNL1A8MU46 457 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 WASF1Q92558 559 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 IFIT3O14879 490 aaKnown RBP17.48■□□□□ 0.39
LRP5-206ENST00000529993 KRT18P05783 430 aaKnown RBP17.48■□□□□ 0.39
LRP5-206ENST00000529993 CHMLP26374 656 aa17.48■□□□□ 0.39
LRP5-206ENST00000529993 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
LRP5-206ENST00000529993 MBD5Q9P267 1494 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 CPA1P15085 419 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 HOXC9P31274 260 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 ORC3Q9UBD5 711 aaPredicted RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 RANBP6O60518 1105 aaKnown RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 SFPQP23246 707 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■■■□□ 16.5
LRP5-206ENST00000529993 ZNF165P49910 485 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
LRP5-206ENST00000529993 ISM2Q6H9L7 571 aa17.47■□□□□ 0.39
LRP5-206ENST00000529993 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
LRP5-206ENST00000529993 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
LRP5-206ENST00000529993 LINS1Q8NG48 757 aa17.46■□□□□ 0.39
LRP5-206ENST00000529993 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
LRP5-206ENST00000529993 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
LRP5-206ENST00000529993 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
LRP5-206ENST00000529993 SSBP05455 408 aaKnown RBP eCLIP17.46■□□□□ 0.39
LRP5-206ENST00000529993 AK2P54819 239 aa17.46■□□□□ 0.39
LRP5-206ENST00000529993 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
LRP5-206ENST00000529993 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.39
LRP5-206ENST00000529993 MAP3K5Q99683 1374 aa17.46■□□□□ 0.38
LRP5-206ENST00000529993 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
LRP5-206ENST00000529993 ACBD3Q9H3P7 528 aa17.45■□□□□ 0.38
LRP5-206ENST00000529993 CHL1O00533 1208 aa17.45■□□□□ 0.38
LRP5-206ENST00000529993 DTNBO60941 627 aa17.45■□□□□ 0.38
LRP5-206ENST00000529993 STIM1Q13586 685 aa17.45■□□□□ 0.38
LRP5-206ENST00000529993 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms