RNA–Protein interactions for RNA: ENST00000529991.1

MS4A4A-205, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-205ENST00000529991 SLIT1O75093 1534 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 NPHP4O75161 1426 aaPredicted RBP9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 SCTRP47872 440 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 EML3Q32P44 896 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 CYP4X1Q8N118 509 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 CYLDQ9NQC7 956 aa9.67□□□□□ -0.86
MS4A4A-205ENST00000529991 TRPM2O94759 1503 aa9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 NNTQ13423 1086 aa9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 PPP1R26Q5T8A7 1209 aaPredicted RBP9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 CCDC116Q8IYX3 515 aa9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 MPNDQ8N594 471 aa9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 SNIP1Q8TAD8 396 aaKnown RBP9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 MED14O60244 1454 aa9.66□□□□□ -0.86
MS4A4A-205ENST00000529991 RIMS2Q9UQ26 1411 aa9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 KDM5AP29375 1690 aaKnown RBP9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 NR5A1Q13285 461 aa9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 ZNF326Q5BKZ1 582 aaKnown RBP9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 ZNF784Q8NCA9 323 aaPredicted RBP9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 NEURL4Q96JN8 1562 aa9.65□□□□□ -0.86
MS4A4A-205ENST00000529991 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.87
MS4A4A-205ENST00000529991 CARNS1A5YM72 827 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 RASA1P20936 1047 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 CRTC2Q53ET0 693 aaPredicted RBP9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 NOD1Q9Y239 953 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 CCDC144AA2RUR9 1427 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 ZFYVE9O95405 1425 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
MS4A4A-205ENST00000529991 CLDN10P78369 228 aa9.63□□□□□ -0.87
MS4A4A-205ENST00000529991 TOR4AQ9NXH8 423 aa9.63□□□□□ -0.87
MS4A4A-205ENST00000529991 ZNF335Q9H4Z2 1342 aaPredicted RBP9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 SMPD1P17405 629 aa9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 KIAA1024Q9UPX6 916 aa9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 CLTCL1P53675 1640 aa9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 POLR1AO95602 1720 aaPredicted RBP9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L21D6R901 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 STAU1O95793 577 aaKnown RBP9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 MYCP01106 439 aaPredicted RBP9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 GTF2IP78347 998 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 PSME1Q06323 249 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 USP4Q13107 963 aa9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
MS4A4A-205ENST00000529991 RPGRIP1LQ68CZ1 1315 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 ERVK-9P63128 1117 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 CC2D2BQ6DHV5 1058 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 HPS1Q92902 700 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 ITPKCQ96DU7 683 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 DNAAF2Q9NVR5 837 aaKnown RBP9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 IQGAP1P46940 1657 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
MS4A4A-205ENST00000529991 LILRA1O75019 489 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 ATG7O95352 703 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 PRR20EP86478 221 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 PRR20CP86479 221 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 PRR20DP86480 221 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 PRR20BP86481 221 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 PRR20AP86496 221 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 MYT1Q01538 1121 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 CBLBQ13191 982 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 RGL3Q3MIN7 710 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 EMILIN1Q9Y6C2 1016 aa9.59□□□□□ -0.87
MS4A4A-205ENST00000529991 SPATA31E1Q6ZUB1 1445 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 LTBP4Q8N2S1 1624 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 ZIC2O95409 532 aaPredicted RBP9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 PTK7Q13308 1070 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 OSBPL3Q9H4L5 887 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 PCDHGA11Q9Y5H2 935 aa9.58□□□□□ -0.88
MS4A4A-205ENST00000529991 MYO5BQ9ULV0 1848 aa9.57□□□□□ -0.88
MS4A4A-205ENST00000529991 FAM196BA6NMK8 535 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms