RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 TIMMDC1Q9NPL8 285 aa6.74□□□□□ -1.33
SVIP-203ENST00000529848 AAASQ9NRG9 546 aa6.74□□□□□ -1.33
SVIP-203ENST00000529848 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
SVIP-203ENST00000529848 BRPF3Q9ULD4 1205 aa6.74□□□□□ -1.33
SVIP-203ENST00000529848 SOS2Q07890 1332 aaPredicted RBP6.74□□□□□ -1.33
SVIP-203ENST00000529848 DNAJC14Q6Y2X3 702 aaPredicted RBP6.73□□□□□ -1.33
SVIP-203ENST00000529848 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
SVIP-203ENST00000529848 CRIPAKQ8N1N5 446 aa6.73□□□□□ -1.33
SVIP-203ENST00000529848 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
SVIP-203ENST00000529848 NEUROD4Q9HD90 331 aa6.73□□□□□ -1.33
SVIP-203ENST00000529848 GPC6Q9Y625 555 aaPredicted RBP6.73□□□□□ -1.33
SVIP-203ENST00000529848 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
SVIP-203ENST00000529848 POTECB2RU33 542 aa6.72□□□□□ -1.33
SVIP-203ENST00000529848 AMOTL2Q9Y2J4 779 aa6.72□□□□□ -1.33
SVIP-203ENST00000529848 ANKRD33BA6NCL7 494 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 ZAP70P43403 619 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 RANGAP1P46060 587 aaPredicted RBP6.71□□□□□ -1.34
SVIP-203ENST00000529848 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.71□□□□□ -1.34
SVIP-203ENST00000529848 ARSJQ5FYB0 599 aaPredicted RBP6.71□□□□□ -1.34
SVIP-203ENST00000529848 ETFBKMTQ8IXQ9 262 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 FAM13BQ9NYF5 915 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 ANKIB1Q9P2G1 1089 aa6.71□□□□□ -1.34
SVIP-203ENST00000529848 MAN1A2O60476 641 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 ATP4AP20648 1035 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 MSX1P28360 303 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 ATCAYQ86WG3 371 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 SUSD3Q96L08 255 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 CITED4Q96RK1 184 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 ATP13A2Q9NQ11 1180 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 GJA3Q9Y6H8 435 aa6.7□□□□□ -1.34
SVIP-203ENST00000529848 TGFBR3LH3BV60 316 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 ZBTB39O15060 712 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 FZD6O60353 706 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 PCSK2P16519 638 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 RBM25P49756 843 aaKnown RBP6.69□□□□□ -1.34
SVIP-203ENST00000529848 DNM1Q05193 864 aaKnown RBP6.69□□□□□ -1.34
SVIP-203ENST00000529848 FAM26DQ5JW98 314 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 PGBD3Q8N328 593 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 HSH2DQ96JZ2 352 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 ZIC5Q96T25 663 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 RBCK1Q9BYM8 510 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
SVIP-203ENST00000529848 MZF1P28698 734 aaPredicted RBP6.68□□□□□ -1.34
SVIP-203ENST00000529848 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 TTC16Q8NEE8 873 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 EDEM1Q92611 657 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
SVIP-203ENST00000529848 BCL2L13Q9BXK5 485 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 GPAMQ9HCL2 828 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 POLIQ9UNA4 740 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 DYRK1BQ9Y463 629 aa6.68□□□□□ -1.34
SVIP-203ENST00000529848 A0A1W2PNR3 127 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 MICAL2O94851 1124 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 F11P03951 625 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 USP5P45974 858 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 IER5Q5VY09 327 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 LRRC69Q6ZNQ3 347 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 TMC7Q7Z402 723 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 NPAS4Q8IUM7 802 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 ZNF280CQ8ND82 737 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 GPR152Q8TDT2 470 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 C7orf43Q8WVR3 580 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 SENP2Q9HC62 589 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
SVIP-203ENST00000529848 PDGFAP04085 211 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 IDH3AP50213 366 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 ARSDP51689 593 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 PIK3R5Q8WYR1 880 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 CRISPLD1Q9H336 500 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 RUBCNLQ9H714 662 aa6.66□□□□□ -1.34
SVIP-203ENST00000529848 RPLP1P05386 114 aaKnown RBP6.65□□□□□ -1.34
SVIP-203ENST00000529848 EFHC2Q5JST6 749 aa6.65□□□□□ -1.34
SVIP-203ENST00000529848 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.34
SVIP-203ENST00000529848 GIPC2Q8TF65 315 aa6.65□□□□□ -1.34
SVIP-203ENST00000529848 ZNF428Q96B54 188 aa6.65□□□□□ -1.34
SVIP-203ENST00000529848 NUDT16Q96DE0 195 aaKnown RBP6.65□□□□□ -1.34
SVIP-203ENST00000529848 FAM129BQ96TA1 746 aa6.65□□□□□ -1.34
SVIP-203ENST00000529848 GMPR2Q9P2T1 348 aaKnown RBP6.65□□□□□ -1.34
SVIP-203ENST00000529848 RBM47A0AV96 593 aaKnown RBP6.64□□□□□ -1.35
SVIP-203ENST00000529848 SOBPA7XYQ1 873 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 EPB42P16452 691 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 EHHADHQ08426 723 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 COL19A1Q14993 1142 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 EAPPQ56P03 285 aaPredicted RBP6.64□□□□□ -1.35
SVIP-203ENST00000529848 ZNF326Q5BKZ1 582 aaKnown RBP6.64□□□□□ -1.35
SVIP-203ENST00000529848 RIPOR1Q6ZS17 1223 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 NLRP8Q86W28 1048 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 GJD3Q8N144 294 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 KLRG1Q96E93 195 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 CEP63Q96MT8 703 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 BCL11AQ9H165 835 aa6.64□□□□□ -1.35
SVIP-203ENST00000529848 DMGDHQ9UI17 866 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms