RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
SMCO4-205ENST00000529714 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
SMCO4-205ENST00000529714 ANKRD13DQ6ZTN6 518 aa17.38■□□□□ 0.37
SMCO4-205ENST00000529714 ARHGEF1Q92888 912 aaKnown RBP17.38■□□□□ 0.37
SMCO4-205ENST00000529714 API5Q9BZZ5 524 aaKnown RBP17.38■□□□□ 0.37
SMCO4-205ENST00000529714 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
SMCO4-205ENST00000529714 SOCS7O14512 581 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 RFC4P35249 363 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 PNPLA7Q6ZV29 1317 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 ADCY9O60503 1353 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
SMCO4-205ENST00000529714 N4BP2Q86UW6 1770 aaPredicted RBP17.36■□□□□ 0.37
SMCO4-205ENST00000529714 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
SMCO4-205ENST00000529714 PHF14O94880 888 aa17.36■□□□□ 0.37
SMCO4-205ENST00000529714 CAMTA2O94983 1202 aa17.36■□□□□ 0.37
SMCO4-205ENST00000529714 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
SMCO4-205ENST00000529714 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
SMCO4-205ENST00000529714 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
SMCO4-205ENST00000529714 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
SMCO4-205ENST00000529714 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 NUP98P52948 1817 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 ZPR1O75312 459 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 MS4A1P11836 297 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 TRIM27P14373 513 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
SMCO4-205ENST00000529714 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
SMCO4-205ENST00000529714 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
SMCO4-205ENST00000529714 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
SMCO4-205ENST00000529714 COL23A1Q86Y22 540 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-205ENST00000529714 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
SMCO4-205ENST00000529714 ARXQ96QS3 562 aa17.34■□□□□ 0.37
SMCO4-205ENST00000529714 ZBTB3Q9H5J0 574 aa17.34■□□□□ 0.37
SMCO4-205ENST00000529714 MAP3K2Q9Y2U5 619 aa17.34■□□□□ 0.37
SMCO4-205ENST00000529714 ATP10DQ9P241 1426 aa17.33■□□□□ 0.36
SMCO4-205ENST00000529714 ABCC4O15439 1325 aa17.33■□□□□ 0.36
SMCO4-205ENST00000529714 SMIM5Q71RC9 77 aa17.33■□□□□ 0.36
SMCO4-205ENST00000529714 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
SMCO4-205ENST00000529714 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
SMCO4-205ENST00000529714 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
SMCO4-205ENST00000529714 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
SMCO4-205ENST00000529714 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
SMCO4-205ENST00000529714 F6X3S4 739 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 NEXNQ0ZGT2 675 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 TCIRG1Q13488 830 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 HLFQ16534 295 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 DZIP1LQ8IYY4 767 aaKnown RBP17.31■□□□□ 0.36
SMCO4-205ENST00000529714 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
SMCO4-205ENST00000529714 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
SMCO4-205ENST00000529714 GYS1P13807 737 aa17.3■□□□□ 0.36
SMCO4-205ENST00000529714 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
SMCO4-205ENST00000529714 TRIM28Q13263 835 aaKnown RBP17.3■□□□□ 0.36
SMCO4-205ENST00000529714 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
SMCO4-205ENST00000529714 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
SMCO4-205ENST00000529714 MSH5O43196 834 aa17.29■□□□□ 0.36
SMCO4-205ENST00000529714 PLIN1O60240 522 aa17.29■□□□□ 0.36
SMCO4-205ENST00000529714 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
SMCO4-205ENST00000529714 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
SMCO4-205ENST00000529714 NLGN1Q8N2Q7 840 aa17.29■□□□□ 0.36
SMCO4-205ENST00000529714 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
SMCO4-205ENST00000529714 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
SMCO4-205ENST00000529714 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
SMCO4-205ENST00000529714 ALDH1L1O75891 902 aa17.28■□□□□ 0.36
SMCO4-205ENST00000529714 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
SMCO4-205ENST00000529714 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
SMCO4-205ENST00000529714 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
SMCO4-205ENST00000529714 MYD88Q99836 296 aa17.28■□□□□ 0.36
SMCO4-205ENST00000529714 IGKV5-2P06315 115 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 FKBP8Q14318 412 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 PARP10Q53GL7 1025 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 CCDC191Q8NCU4 936 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 CLUAP1Q96AJ1 413 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
SMCO4-205ENST00000529714 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
SMCO4-205ENST00000529714 RLBP1P12271 317 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 TM4SF1P30408 202 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 NLRP10Q86W26 655 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 TMEM57Q8N5G2 664 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 CWC25Q9NXE8 425 aaPredicted RBP17.25■□□□□ 0.35
SMCO4-205ENST00000529714 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMCO4-205ENST00000529714 CARMIL3Q8ND23 1372 aa17.25■□□□□ 0.35
SMCO4-205ENST00000529714 UBN2Q6ZU65 1347 aa17.24■□□□□ 0.35
SMCO4-205ENST00000529714 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
SMCO4-205ENST00000529714 NFIXQ14938 502 aa17.24■□□□□ 0.35
SMCO4-205ENST00000529714 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
SMCO4-205ENST00000529714 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
SMCO4-205ENST00000529714 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
SMCO4-205ENST00000529714 PDGFDQ9GZP0 370 aaPredicted RBP17.24■□□□□ 0.35
SMCO4-205ENST00000529714 GPTP24298 496 aa17.23■□□□□ 0.35
SMCO4-205ENST00000529714 GCKRQ14397 625 aa17.23■□□□□ 0.35
SMCO4-205ENST00000529714 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
SMCO4-205ENST00000529714 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms