RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 KSR2Q6VAB6 950 aa14.43□□□□□ -0.1
CLP1-203ENST00000529430 KIF1BPQ96EK5 621 aa14.43□□□□□ -0.1
CLP1-203ENST00000529430 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
CLP1-203ENST00000529430 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
CLP1-203ENST00000529430 EPB41L2O43491 1005 aaKnown RBP14.42□□□□□ -0.1
CLP1-203ENST00000529430 ST18O60284 1047 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 SURF6O75683 361 aaKnown RBP14.42□□□□□ -0.1
CLP1-203ENST00000529430 MCCP23508 829 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 GBP4Q96PP9 640 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 ISY1Q9ULR0 285 aaKnown RBP14.42□□□□□ -0.1
CLP1-203ENST00000529430 MRC1P22897 1456 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 SRGAP3O43295 1099 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 FMNL2Q96PY5 1086 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 TNS2Q63HR2 1409 aa14.42□□□□□ -0.1
CLP1-203ENST00000529430 ADCY9O60503 1353 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 SCN11AQ9UI33 1791 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 MTX1Q13505 466 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 RHPN1Q8TCX5 695 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 DDX21Q9NR30 783 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLP1-203ENST00000529430 LRP6O75581 1613 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 BCL9LQ86UU0 1499 aa14.41□□□□□ -0.1
CLP1-203ENST00000529430 A0A0G2JS52 829 aa14.4□□□□□ -0.1
CLP1-203ENST00000529430 SLC39A6Q13433 755 aa14.4□□□□□ -0.1
CLP1-203ENST00000529430 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
CLP1-203ENST00000529430 ESYT1Q9BSJ8 1104 aa14.4□□□□□ -0.1
CLP1-203ENST00000529430 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
CLP1-203ENST00000529430 TRIM6-TRIM34B2RNG4 842 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 TRAK2O60296 914 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 NBPF7P0C2Y1 421 aaPredicted RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 C9orf78Q9NZ63 289 aaPredicted RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 MAP3K2Q9Y2U5 619 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 CD2BP2O95400 341 aaKnown RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 SNRPA1P09661 255 aaKnown RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 CHMLP26374 656 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 ERC1Q8IUD2 1116 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 LINS1Q8NG48 757 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
CLP1-203ENST00000529430 CWC22Q9HCG8 908 aaKnown RBP14.39□□□□□ -0.11
CLP1-203ENST00000529430 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLP1-203ENST00000529430 MCM2P49736 904 aa14.38□□□□□ -0.11
CLP1-203ENST00000529430 MRE11P49959 708 aa14.38□□□□□ -0.11
CLP1-203ENST00000529430 ANAPC15P60006 121 aa14.38□□□□□ -0.11
CLP1-203ENST00000529430 AFF2P51816 1311 aa14.38□□□□□ -0.11
CLP1-203ENST00000529430 ANXA1P04083 346 aa14.37□□□□□ -0.11
CLP1-203ENST00000529430 TNPO1Q92973 898 aaKnown RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 SIPA1L3O60292 1781 aaPredicted RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 NUCB2P80303 420 aa14.37□□□□□ -0.11
CLP1-203ENST00000529430 SKOR2Q2VWA4 1001 aaPredicted RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 ZNF496Q96IT1 587 aaPredicted RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 IL1RAPL2Q9NP60 686 aa14.37□□□□□ -0.11
CLP1-203ENST00000529430 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
CLP1-203ENST00000529430 UTYO14607 1347 aa14.36□□□□□ -0.11
CLP1-203ENST00000529430 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
CLP1-203ENST00000529430 USP42Q9H9J4 1324 aaKnown RBP14.36□□□□□ -0.11
CLP1-203ENST00000529430 OS9Q13438 667 aaPredicted RBP14.36□□□□□ -0.11
CLP1-203ENST00000529430 NEXNQ0ZGT2 675 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 CNTROBQ8N137 903 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 CLASRPQ8N2M8 674 aaKnown RBP14.35□□□□□ -0.11
CLP1-203ENST00000529430 IL17RAQ96F46 866 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
CLP1-203ENST00000529430 GOLGA6L22H0YM25 854 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 GRM8O00222 908 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 PDIA6Q15084 440 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 CLEC17AQ6ZS10 378 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 NUTM1Q86Y26 1132 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 GPATCH3Q96I76 525 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 GJD4Q96KN9 370 aaPredicted RBP14.34□□□□□ -0.11
CLP1-203ENST00000529430 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
CLP1-203ENST00000529430 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 GLRX3O76003 335 aaKnown RBP14.34□□□□□ -0.11
CLP1-203ENST00000529430 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
CLP1-203ENST00000529430 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.34□□□□□ -0.11
CLP1-203ENST00000529430 PRAMEF22A3QJZ6 481 aa14.33□□□□□ -0.12
CLP1-203ENST00000529430 PI4K2BQ8TCG2 481 aa14.33□□□□□ -0.12
CLP1-203ENST00000529430 PIGBQ92521 554 aa14.33□□□□□ -0.12
CLP1-203ENST00000529430 TEX13AQ9BXU3 409 aaPredicted RBP14.33□□□□□ -0.12
CLP1-203ENST00000529430 ANO2Q9NQ90 1003 aa14.33□□□□□ -0.12
CLP1-203ENST00000529430 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
CLP1-203ENST00000529430 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
CLP1-203ENST00000529430 MARCH10Q8NA82 808 aaPredicted RBP14.32□□□□□ -0.12
CLP1-203ENST00000529430 PRIM1P49642 420 aaKnown RBP14.32□□□□□ -0.12
CLP1-203ENST00000529430 AIMP1Q12904 312 aaKnown RBP14.32□□□□□ -0.12
CLP1-203ENST00000529430 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CLP1-203ENST00000529430 BCL9O00512 1426 aa14.31□□□□□ -0.12
CLP1-203ENST00000529430 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
CLP1-203ENST00000529430 CLCN1P35523 988 aa14.31□□□□□ -0.12
CLP1-203ENST00000529430 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLP1-203ENST00000529430 CWF19L2Q2TBE0 894 aaKnown RBP14.31□□□□□ -0.12
CLP1-203ENST00000529430 VSIG10Q8N0Z9 540 aa14.31□□□□□ -0.12
CLP1-203ENST00000529430 RUFY2Q8WXA3 655 aa14.31□□□□□ -0.12
CLP1-203ENST00000529430 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
CLP1-203ENST00000529430 QTRT2Q9H974 415 aaKnown RBP14.31□□□□□ -0.12
CLP1-203ENST00000529430 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
CLP1-203ENST00000529430 NEK4P51957 841 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms