RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 PDIA6Q15084 440 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 HSP90AB3PQ58FF7 597 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
MACF1-228ENST00000528611 LRP10Q7Z4F1 713 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 HDAC5Q9UQL6 1122 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 RNF123Q5XPI4 1314 aa7.93□□□□□ -1.14
MACF1-228ENST00000528611 C4BP0C0L5 1744 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 QSER1Q2KHR3 1735 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 EIF2S2P20042 333 aaKnown RBP7.92□□□□□ -1.14
MACF1-228ENST00000528611 TRIM28Q13263 835 aaKnown RBP7.92□□□□□ -1.14
MACF1-228ENST00000528611 TRAPPC3LQ5T215 181 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 ANKRD13DQ6ZTN6 518 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 PTF1AQ7RTS3 328 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 MRPL50Q8N5N7 158 aaKnown RBP7.92□□□□□ -1.14
MACF1-228ENST00000528611 PLBD2Q8NHP8 589 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 SSH1Q8WYL5 1049 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 AK7Q96M32 723 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 LRRC4BQ9NT99 713 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 SMC4Q9NTJ3 1288 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 ZNF652Q9Y2D9 606 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 PXDNLA1KZ92 1463 aa7.92□□□□□ -1.14
MACF1-228ENST00000528611 NBPF26B4DH59 902 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
MACF1-228ENST00000528611 HSP90B1P14625 803 aaKnown RBP7.91□□□□□ -1.14
MACF1-228ENST00000528611 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
MACF1-228ENST00000528611 FLIIQ13045 1269 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 SLC15A2Q16348 729 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 ZKSCAN2Q63HK3 967 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
MACF1-228ENST00000528611 KSR2Q6VAB6 950 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 ATF7IPQ6VMQ6 1270 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 LINC00116Q8NCU8 138 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 STK32BQ9NY57 414 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 CHPF2Q9P2E5 772 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 PCDH10Q9P2E7 1040 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 NARFQ9UHQ1 456 aa7.91□□□□□ -1.14
MACF1-228ENST00000528611 ATP10DQ9P241 1426 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 COL15A1P39059 1388 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 NEXNQ0ZGT2 675 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 EZH2Q15910 746 aaKnown RBP7.9□□□□□ -1.14
MACF1-228ENST00000528611 KRT24Q2M2I5 525 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 ERICH6BQ5W0A0 696 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 POTEGQ6S5H5 508 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 GIGYF2Q6Y7W6 1299 aaKnown RBP7.9□□□□□ -1.14
MACF1-228ENST00000528611 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 ZBTB1Q9Y2K1 713 aa7.9□□□□□ -1.14
MACF1-228ENST00000528611 MAP3K15Q6ZN16 1313 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 PRAMEF22A3QJZ6 481 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 GNPATO15228 680 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 ZPR1O75312 459 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 ALDH1L1O75891 902 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 A1BGP04217 495 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 RFC4P35249 363 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 CCT4P50991 539 aaKnown RBP7.89□□□□□ -1.15
MACF1-228ENST00000528611 FKBP5Q13451 457 aaPredicted RBP7.89□□□□□ -1.15
MACF1-228ENST00000528611 PARP10Q53GL7 1025 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 INTS3Q68E01 1043 aaKnown RBP7.89□□□□□ -1.15
MACF1-228ENST00000528611 DZIP3Q86Y13 1208 aaKnown RBP7.89□□□□□ -1.15
MACF1-228ENST00000528611 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
MACF1-228ENST00000528611 MYH14Q7Z406 1995 aaKnown RBP7.89□□□□□ -1.15
MACF1-228ENST00000528611 UBR3Q6ZT12 1888 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 USP42Q9H9J4 1324 aaKnown RBP7.88□□□□□ -1.15
MACF1-228ENST00000528611 SENP3-EIF4A1A0A087X0R7 540 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
MACF1-228ENST00000528611 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
MACF1-228ENST00000528611 TCIRG1Q13488 830 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 ILDR2Q71H61 639 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 CCDC191Q8NCU4 936 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 LINS1Q8NG48 757 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 DNAAF4Q8WXU2 420 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 METTL22Q9BUU2 404 aaPredicted RBP7.88□□□□□ -1.15
MACF1-228ENST00000528611 NUP188Q5SRE5 1749 aa7.88□□□□□ -1.15
MACF1-228ENST00000528611 ABCC4O15439 1325 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 PI4KAP2A4QPH2 592 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 SOCS7O14512 581 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 BCAR3O75815 825 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 MYL6BP14649 208 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 RRP1P56182 461 aaKnown RBP7.87□□□□□ -1.15
MACF1-228ENST00000528611 DEFB132Q7Z7B7 95 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 DZIP1LQ8IYY4 767 aaKnown RBP7.87□□□□□ -1.15
MACF1-228ENST00000528611 PI4KAP1Q8N8J0 262 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 XAGE3Q8WTP9 111 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 ARHGEF1Q92888 912 aaKnown RBP7.87□□□□□ -1.15
MACF1-228ENST00000528611 NOB1Q9ULX3 412 aaKnown RBP7.87□□□□□ -1.15
MACF1-228ENST00000528611 DDX19BQ9UMR2 479 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 PDZRN3Q9UPQ7 1066 aa7.87□□□□□ -1.15
MACF1-228ENST00000528611 CAMTA2O94983 1202 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 TRIM27P14373 513 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 PROSER3Q2NL68 480 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 PPP1R42Q7Z4L9 355 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 FTSJ3Q8IY81 847 aaKnown RBP7.86□□□□□ -1.15
MACF1-228ENST00000528611 ZNF34Q8IZ26 560 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
MACF1-228ENST00000528611 ISCA1Q9BUE6 129 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 SRCIN1Q9C0H9 1055 aa7.86□□□□□ -1.15
MACF1-228ENST00000528611 NYXQ9GZU5 481 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms