RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 TTLL6Q8N841 843 aa18.25■□□□□ 0.51
CHRDL2-205ENST00000528471 BRIP1Q9BX63 1249 aa18.25■□□□□ 0.51
CHRDL2-205ENST00000528471 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
CHRDL2-205ENST00000528471 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
CHRDL2-205ENST00000528471 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
CHRDL2-205ENST00000528471 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
CHRDL2-205ENST00000528471 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
CHRDL2-205ENST00000528471 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
CHRDL2-205ENST00000528471 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
CHRDL2-205ENST00000528471 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 RGL2O15211 777 aa18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 KIF6Q6ZMV9 814 aa18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 RNF181Q9P0P0 153 aa18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHRDL2-205ENST00000528471 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
CHRDL2-205ENST00000528471 MYL6BP14649 208 aa18.22■□□□□ 0.51
CHRDL2-205ENST00000528471 BABAM1Q9NWV8 329 aa18.22■□□□□ 0.51
CHRDL2-205ENST00000528471 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
CHRDL2-205ENST00000528471 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
CHRDL2-205ENST00000528471 ERBB4Q15303 1308 aa18.2■□□□□ 0.5
CHRDL2-205ENST00000528471 DICER1Q9UPY3 1922 aaKnown RBP18.2■□□□□ 0.5
CHRDL2-205ENST00000528471 TNRC6CQ9HCJ0 1690 aaKnown RBP18.2■□□□□ 0.5
CHRDL2-205ENST00000528471 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
CHRDL2-205ENST00000528471 RASSF7Q02833 373 aa18.2■□□□□ 0.5
CHRDL2-205ENST00000528471 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CHRDL2-205ENST00000528471 HLFQ16534 295 aa18.19■□□□□ 0.5
CHRDL2-205ENST00000528471 TPTE2Q6XPS3 522 aa18.19■□□□□ 0.5
CHRDL2-205ENST00000528471 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
CHRDL2-205ENST00000528471 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
CHRDL2-205ENST00000528471 EIF2S2P20042 333 aaKnown RBP18.18■□□□□ 0.5
CHRDL2-205ENST00000528471 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
CHRDL2-205ENST00000528471 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
CHRDL2-205ENST00000528471 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
CHRDL2-205ENST00000528471 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
CHRDL2-205ENST00000528471 ERVV-1B6SEH8 477 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 SRGNP10124 158 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 LMNB1P20700 586 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 MASTLQ96GX5 879 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
CHRDL2-205ENST00000528471 KIF3CO14782 793 aa18.16■□□□□ 0.5
CHRDL2-205ENST00000528471 C21orf2O43822 256 aa18.16■□□□□ 0.5
CHRDL2-205ENST00000528471 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
CHRDL2-205ENST00000528471 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
CHRDL2-205ENST00000528471 ZC3H4Q9UPT8 1303 aaKnown RBP18.15■□□□□ 0.5
CHRDL2-205ENST00000528471 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
CHRDL2-205ENST00000528471 NFKBIEO00221 500 aa18.14■□□□□ 0.49
CHRDL2-205ENST00000528471 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
CHRDL2-205ENST00000528471 CHL1O00533 1208 aa18.13■□□□□ 0.49
CHRDL2-205ENST00000528471 NPR1P16066 1061 aa18.13■□□□□ 0.49
CHRDL2-205ENST00000528471 GPTP24298 496 aa18.13■□□□□ 0.49
CHRDL2-205ENST00000528471 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
CHRDL2-205ENST00000528471 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
CHRDL2-205ENST00000528471 ABCC12Q96J65 1359 aa18.12■□□□□ 0.49
CHRDL2-205ENST00000528471 IBTKQ9P2D0 1353 aaPredicted RBP18.12■□□□□ 0.49
CHRDL2-205ENST00000528471 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
CHRDL2-205ENST00000528471 APAF1O14727 1248 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 ANXA1P04083 346 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 GIGYF2Q6Y7W6 1299 aaKnown RBP18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 NUTM1Q86Y26 1132 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
CHRDL2-205ENST00000528471 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
CHRDL2-205ENST00000528471 TOMM70O94826 608 aa18.1■□□□□ 0.49
CHRDL2-205ENST00000528471 PRELPP51888 382 aa18.1■□□□□ 0.49
CHRDL2-205ENST00000528471 PDIA6Q15084 440 aa18.1■□□□□ 0.49
CHRDL2-205ENST00000528471 KLRG2A4D1S0 409 aaPredicted RBP18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 RIC1Q4ADV7 1423 aa18.09■□□□□ 0.49
CHRDL2-205ENST00000528471 LTBP3Q9NS15 1303 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 LAMB2P55268 1798 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 HOXB7P09629 217 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 HSPA6P17066 643 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 PARP10Q53GL7 1025 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 CCDC93Q567U6 631 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 ZNF34Q8IZ26 560 aa18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.49
CHRDL2-205ENST00000528471 ALDH1B1P30837 517 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 SUSD4Q5VX71 490 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 RPGRQ92834 1020 aaKnown RBP18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 CHPF2Q9P2E5 772 aa18.07■□□□□ 0.48
CHRDL2-205ENST00000528471 NTSR2O95665 410 aa18.06■□□□□ 0.48
CHRDL2-205ENST00000528471 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
CHRDL2-205ENST00000528471 MBIPQ9NS73 344 aa18.06■□□□□ 0.48
CHRDL2-205ENST00000528471 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms