RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 H0YIN7 160 aa20.3■□□□□ 0.84
CAPN1-213ENST00000527897 KIF6Q6ZMV9 814 aa20.3■□□□□ 0.84
CAPN1-213ENST00000527897 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
CAPN1-213ENST00000527897 BABAM1Q9NWV8 329 aa20.3■□□□□ 0.84
CAPN1-213ENST00000527897 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
CAPN1-213ENST00000527897 ATP10DQ9P241 1426 aa20.29■□□□□ 0.84
CAPN1-213ENST00000527897 ANKRD31Q8N7Z5 1873 aa20.29■□□□□ 0.84
CAPN1-213ENST00000527897 ST5P78524 1137 aa20.29■□□□□ 0.84
CAPN1-213ENST00000527897 HLFQ16534 295 aa20.29■□□□□ 0.84
CAPN1-213ENST00000527897 CLEC4GQ6UXB4 293 aa20.29■□□□□ 0.84
CAPN1-213ENST00000527897 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.845e-7■■■□□ 17.3
CAPN1-213ENST00000527897 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
CAPN1-213ENST00000527897 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
CAPN1-213ENST00000527897 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
CAPN1-213ENST00000527897 CHL1O00533 1208 aa20.27■□□□□ 0.84
CAPN1-213ENST00000527897 ANXA1P04083 346 aa20.27■□□□□ 0.84
CAPN1-213ENST00000527897 PDE6BP35913 854 aa20.27■□□□□ 0.84
CAPN1-213ENST00000527897 ZBTB3Q9H5J0 574 aa20.27■□□□□ 0.84
CAPN1-213ENST00000527897 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
CAPN1-213ENST00000527897 DLEC1Q9Y238 1755 aa20.26■□□□□ 0.83
CAPN1-213ENST00000527897 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
CAPN1-213ENST00000527897 MAP3K15Q6ZN16 1313 aa20.26■□□□□ 0.83
CAPN1-213ENST00000527897 NUP98P52948 1817 aa20.25■□□□□ 0.83
CAPN1-213ENST00000527897 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-213ENST00000527897 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-213ENST00000527897 ERBB4Q15303 1308 aa20.25■□□□□ 0.83
CAPN1-213ENST00000527897 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
CAPN1-213ENST00000527897 COL11A2P13942 1736 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-213ENST00000527897 ADCY9O60503 1353 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 GPTP24298 496 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 TPTE2Q6XPS3 522 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
CAPN1-213ENST00000527897 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
CAPN1-213ENST00000527897 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
CAPN1-213ENST00000527897 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
CAPN1-213ENST00000527897 MBIPQ9NS73 344 aa20.22■□□□□ 0.83
CAPN1-213ENST00000527897 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
CAPN1-213ENST00000527897 RGL2O15211 777 aa20.21■□□□□ 0.83
CAPN1-213ENST00000527897 RASSF7Q02833 373 aa20.21■□□□□ 0.83
CAPN1-213ENST00000527897 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
CAPN1-213ENST00000527897 PDIA6Q15084 440 aa20.21■□□□□ 0.83
CAPN1-213ENST00000527897 HDGFL1Q5TGJ6 251 aa20.21■□□□□ 0.83
CAPN1-213ENST00000527897 RNF181Q9P0P0 153 aa20.2■□□□□ 0.82
CAPN1-213ENST00000527897 GNAI1P63096 354 aa20.19■□□□□ 0.82
CAPN1-213ENST00000527897 NUTM1Q86Y26 1132 aa20.19■□□□□ 0.82
CAPN1-213ENST00000527897 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
CAPN1-213ENST00000527897 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
CAPN1-213ENST00000527897 CHPF2Q9P2E5 772 aa20.19■□□□□ 0.82
CAPN1-213ENST00000527897 C21orf2O43822 256 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 SRGNP10124 158 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 DUSP27Q5VZP5 1158 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 GIGYF2Q6Y7W6 1299 aaKnown RBP20.18■□□□□ 0.82
CAPN1-213ENST00000527897 COPS6Q7L5N1 327 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 NYXQ9GZU5 481 aa20.18■□□□□ 0.82
CAPN1-213ENST00000527897 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
CAPN1-213ENST00000527897 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
CAPN1-213ENST00000527897 CNKSR1Q969H4 720 aa20.17■□□□□ 0.82
CAPN1-213ENST00000527897 DDX21Q9NR30 783 aaKnown RBP eCLIP20.17■□□□□ 0.82
CAPN1-213ENST00000527897 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
CAPN1-213ENST00000527897 SBF1O95248 1867 aa20.17■□□□□ 0.82
CAPN1-213ENST00000527897 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
CAPN1-213ENST00000527897 ZNF853P0CG23 659 aa20.16■□□□□ 0.82
CAPN1-213ENST00000527897 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
CAPN1-213ENST00000527897 ERFEQ4G0M1 354 aa20.16■□□□□ 0.82
CAPN1-213ENST00000527897 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
CAPN1-213ENST00000527897 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-213ENST00000527897 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
CAPN1-213ENST00000527897 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
CAPN1-213ENST00000527897 CCDC88AQ3V6T2 1871 aa20.15■□□□□ 0.82
CAPN1-213ENST00000527897 HOXB7P09629 217 aa20.14■□□□□ 0.81
CAPN1-213ENST00000527897 NPR1P16066 1061 aa20.14■□□□□ 0.81
CAPN1-213ENST00000527897 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
CAPN1-213ENST00000527897 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
CAPN1-213ENST00000527897 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
CAPN1-213ENST00000527897 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
CAPN1-213ENST00000527897 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
CAPN1-213ENST00000527897 ZNF428Q96B54 188 aa20.13■□□□□ 0.81
CAPN1-213ENST00000527897 NFKBIEO00221 500 aa20.12■□□□□ 0.81
CAPN1-213ENST00000527897 LMNB1P20700 586 aa20.12■□□□□ 0.81
CAPN1-213ENST00000527897 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
CAPN1-213ENST00000527897 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 ARFGEF2Q9Y6D5 1785 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 PARP10Q53GL7 1025 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 HSP90AB3PQ58FF7 597 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
CAPN1-213ENST00000527897 KLRG2A4D1S0 409 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-213ENST00000527897 NTSR2O95665 410 aa20.1■□□□□ 0.81
CAPN1-213ENST00000527897 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
CAPN1-213ENST00000527897 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
CAPN1-213ENST00000527897 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
CAPN1-213ENST00000527897 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
CAPN1-213ENST00000527897 PRELPP51888 382 aa20.09■□□□□ 0.81
CAPN1-213ENST00000527897 NMRK2Q9NPI5 230 aa20.09■□□□□ 0.81
CAPN1-213ENST00000527897 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
CAPN1-213ENST00000527897 ALDH1B1P30837 517 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms