RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
SCN3B-204ENST00000527836 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
SCN3B-204ENST00000527836 GTF2E1P29083 439 aaPredicted RBP16.29■□□□□ 0.2
SCN3B-204ENST00000527836 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
SCN3B-204ENST00000527836 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
SCN3B-204ENST00000527836 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
SCN3B-204ENST00000527836 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
SCN3B-204ENST00000527836 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
SCN3B-204ENST00000527836 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
SCN3B-204ENST00000527836 RASSF7Q02833 373 aa16.28■□□□□ 0.2
SCN3B-204ENST00000527836 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
SCN3B-204ENST00000527836 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
SCN3B-204ENST00000527836 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
SCN3B-204ENST00000527836 KIF3CO14782 793 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 MYL6BP14649 208 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 LMNB1P20700 586 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 CNKSR1Q969H4 720 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
SCN3B-204ENST00000527836 C21orf2O43822 256 aa16.26■□□□□ 0.19
SCN3B-204ENST00000527836 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
SCN3B-204ENST00000527836 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
SCN3B-204ENST00000527836 RGL2O15211 777 aa16.25■□□□□ 0.19
SCN3B-204ENST00000527836 TOMM70O94826 608 aa16.25■□□□□ 0.19
SCN3B-204ENST00000527836 STYK1Q6J9G0 422 aa16.25■□□□□ 0.19
SCN3B-204ENST00000527836 MASTLQ96GX5 879 aa16.25■□□□□ 0.19
SCN3B-204ENST00000527836 HSPA6P17066 643 aa16.24■□□□□ 0.19
SCN3B-204ENST00000527836 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
SCN3B-204ENST00000527836 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
SCN3B-204ENST00000527836 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
SCN3B-204ENST00000527836 NUP98P52948 1817 aa16.24■□□□□ 0.19
SCN3B-204ENST00000527836 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
SCN3B-204ENST00000527836 SRGNP10124 158 aa16.23■□□□□ 0.19
SCN3B-204ENST00000527836 HLFQ16534 295 aa16.23■□□□□ 0.19
SCN3B-204ENST00000527836 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
SCN3B-204ENST00000527836 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
SCN3B-204ENST00000527836 NYXQ9GZU5 481 aa16.23■□□□□ 0.19
SCN3B-204ENST00000527836 MAP3K15Q6ZN16 1313 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 NPR1P16066 1061 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
SCN3B-204ENST00000527836 ERBB4Q15303 1308 aa16.21■□□□□ 0.19
SCN3B-204ENST00000527836 NFKBIEO00221 500 aa16.21■□□□□ 0.19
SCN3B-204ENST00000527836 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
SCN3B-204ENST00000527836 TTLL7Q6ZT98 887 aa16.21■□□□□ 0.19
SCN3B-204ENST00000527836 TAOK3Q9H2K8 898 aa16.21■□□□□ 0.19
SCN3B-204ENST00000527836 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
SCN3B-204ENST00000527836 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.18
SCN3B-204ENST00000527836 FER1L6Q2WGJ9 1857 aa16.2■□□□□ 0.18
SCN3B-204ENST00000527836 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
SCN3B-204ENST00000527836 GPTP24298 496 aa16.2■□□□□ 0.18
SCN3B-204ENST00000527836 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
SCN3B-204ENST00000527836 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
SCN3B-204ENST00000527836 ARFGEF2Q9Y6D5 1785 aa16.19■□□□□ 0.18
SCN3B-204ENST00000527836 RBM46Q8TBY0 533 aaKnown RBP16.19■□□□□ 0.18
SCN3B-204ENST00000527836 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
SCN3B-204ENST00000527836 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
SCN3B-204ENST00000527836 GLTPD2A6NH11 291 aa16.18■□□□□ 0.18
SCN3B-204ENST00000527836 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
SCN3B-204ENST00000527836 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
SCN3B-204ENST00000527836 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
SCN3B-204ENST00000527836 NUTM1Q86Y26 1132 aa16.18■□□□□ 0.18
SCN3B-204ENST00000527836 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
SCN3B-204ENST00000527836 APLP1P51693 650 aa16.17■□□□□ 0.18
SCN3B-204ENST00000527836 PRELPP51888 382 aa16.17■□□□□ 0.18
SCN3B-204ENST00000527836 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
SCN3B-204ENST00000527836 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
SCN3B-204ENST00000527836 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
SCN3B-204ENST00000527836 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
SCN3B-204ENST00000527836 CEP350Q5VT06 3117 aa16.16■□□□□ 0.18
SCN3B-204ENST00000527836 LTBP3Q9NS15 1303 aa16.16■□□□□ 0.18
SCN3B-204ENST00000527836 CHL1O00533 1208 aa16.15■□□□□ 0.18
SCN3B-204ENST00000527836 ANXA1P04083 346 aa16.15■□□□□ 0.18
SCN3B-204ENST00000527836 FSTL1Q12841 308 aa16.15■□□□□ 0.18
SCN3B-204ENST00000527836 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
SCN3B-204ENST00000527836 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
SCN3B-204ENST00000527836 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
SCN3B-204ENST00000527836 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
SCN3B-204ENST00000527836 SUSD4Q5VX71 490 aa16.14■□□□□ 0.17
SCN3B-204ENST00000527836 RTKN2Q8IZC4 609 aa16.14■□□□□ 0.17
SCN3B-204ENST00000527836 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
SCN3B-204ENST00000527836 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
SCN3B-204ENST00000527836 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
SCN3B-204ENST00000527836 PROSER3Q2NL68 480 aa16.13■□□□□ 0.17
SCN3B-204ENST00000527836 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
SCN3B-204ENST00000527836 ZNF34Q8IZ26 560 aa16.13■□□□□ 0.17
SCN3B-204ENST00000527836 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
SCN3B-204ENST00000527836 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
SCN3B-204ENST00000527836 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
SCN3B-204ENST00000527836 APAF1O14727 1248 aa16.12■□□□□ 0.17
SCN3B-204ENST00000527836 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCN3B-204ENST00000527836 PDIA6Q15084 440 aa16.12■□□□□ 0.17
SCN3B-204ENST00000527836 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
SCN3B-204ENST00000527836 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
SCN3B-204ENST00000527836 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
SCN3B-204ENST00000527836 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
SCN3B-204ENST00000527836 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms