RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 PDIA6Q15084 440 aa29.9■■■□□ 2.38
LRRK1-206ENST00000527698 USPL1Q5W0Q7 1092 aa29.9■■■□□ 2.38
LRRK1-206ENST00000527698 ERVV-1B6SEH8 477 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 KIF6Q6ZMV9 814 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 TRMT2AQ8IZ69 625 aaKnown RBP29.89■■■□□ 2.38
LRRK1-206ENST00000527698 TSPYL6Q8N831 410 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 STK31Q9BXU1 1019 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 TBC1D2BQ9UPU7 963 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 ZBED9Q6R2W3 1325 aa29.89■■■□□ 2.38
LRRK1-206ENST00000527698 PIP4K2AP48426 406 aaPredicted RBP29.88■■■□□ 2.37
LRRK1-206ENST00000527698 NECTIN2Q92692 538 aa29.88■■■□□ 2.37
LRRK1-206ENST00000527698 CHPF2Q9P2E5 772 aa29.88■■■□□ 2.37
LRRK1-206ENST00000527698 ADCY9O60503 1353 aa29.88■■■□□ 2.37
LRRK1-206ENST00000527698 ZNF428Q96B54 188 aa29.87■■■□□ 2.37
LRRK1-206ENST00000527698 SRP68Q9UHB9 627 aaKnown RBP29.87■■■□□ 2.37
LRRK1-206ENST00000527698 SCN7AQ01118 1682 aa29.87■■■□□ 2.37
LRRK1-206ENST00000527698 BCORQ6W2J9 1755 aa29.86■■■□□ 2.37
LRRK1-206ENST00000527698 CAMTA2O94983 1202 aa29.86■■■□□ 2.37
LRRK1-206ENST00000527698 KIF13BQ9NQT8 1826 aa29.86■■■□□ 2.37
LRRK1-206ENST00000527698 VAMP4O75379 141 aa29.85■■■□□ 2.37
LRRK1-206ENST00000527698 CT47B1P0C2W7 299 aaPredicted RBP29.85■■■□□ 2.37
LRRK1-206ENST00000527698 LRP10Q7Z4F1 713 aa29.85■■■□□ 2.37
LRRK1-206ENST00000527698 MAP3K15Q6ZN16 1313 aa29.84■■■□□ 2.37
LRRK1-206ENST00000527698 FKBP8Q14318 412 aa29.83■■■□□ 2.37
LRRK1-206ENST00000527698 PARP3Q9Y6F1 533 aa29.83■■■□□ 2.37
LRRK1-206ENST00000527698 MMP10P09238 476 aa29.82■■■□□ 2.36
LRRK1-206ENST00000527698 TM4SF1P30408 202 aa29.82■■■□□ 2.36
LRRK1-206ENST00000527698 CDCA7LQ96GN5 454 aa29.82■■■□□ 2.36
LRRK1-206ENST00000527698 PROSER3Q2NL68 480 aa29.81■■■□□ 2.36
LRRK1-206ENST00000527698 COPS6Q7L5N1 327 aa29.81■■■□□ 2.36
LRRK1-206ENST00000527698 BCL2L12Q9HB09 334 aa29.81■■■□□ 2.36
LRRK1-206ENST00000527698 GPBP1L1Q9HC44 474 aaPredicted RBP29.81■■■□□ 2.36
LRRK1-206ENST00000527698 NUP98P52948 1817 aa29.8■■■□□ 2.36
LRRK1-206ENST00000527698 XAGE3Q8WTP9 111 aa29.79■■■□□ 2.36
LRRK1-206ENST00000527698 SETDB2Q96T68 719 aa29.79■■■□□ 2.36
LRRK1-206ENST00000527698 CEP350Q5VT06 3117 aa29.79■■■□□ 2.36
LRRK1-206ENST00000527698 KIAA1551Q9HCM1 1747 aa29.79■■■□□ 2.36
LRRK1-206ENST00000527698 DDX58O95786 925 aaKnown RBP29.78■■■□□ 2.36
LRRK1-206ENST00000527698 HSP90AB3PQ58FF7 597 aa29.78■■■□□ 2.36
LRRK1-206ENST00000527698 TTLL7Q6ZT98 887 aa29.78■■■□□ 2.36
LRRK1-206ENST00000527698 ANKRD13DQ6ZTN6 518 aa29.78■■■□□ 2.36
LRRK1-206ENST00000527698 ANXA1P04083 346 aa29.77■■■□□ 2.36
LRRK1-206ENST00000527698 SLC4A2P04920 1241 aa29.77■■■□□ 2.36
LRRK1-206ENST00000527698 GIGYF2Q6Y7W6 1299 aaKnown RBP29.77■■■□□ 2.36
LRRK1-206ENST00000527698 PLBD2Q8NHP8 589 aa29.77■■■□□ 2.36
LRRK1-206ENST00000527698 AIMP1Q12904 312 aaKnown RBP29.76■■■□□ 2.35
LRRK1-206ENST00000527698 NFIXQ14938 502 aa29.76■■■□□ 2.35
LRRK1-206ENST00000527698 CARMIL3Q8ND23 1372 aa29.76■■■□□ 2.35
LRRK1-206ENST00000527698 TBC1D9BQ66K14 1250 aa29.74■■■□□ 2.35
LRRK1-206ENST00000527698 PXDNLA1KZ92 1463 aa29.74■■■□□ 2.35
LRRK1-206ENST00000527698 POLRMTO00411 1230 aaKnown RBP29.73■■■□□ 2.35
LRRK1-206ENST00000527698 TGFB2P61812 414 aa29.73■■■□□ 2.35
LRRK1-206ENST00000527698 ZBTB3Q9H5J0 574 aa29.73■■■□□ 2.35
LRRK1-206ENST00000527698 N4BP2Q86UW6 1770 aaPredicted RBP29.72■■■□□ 2.35
LRRK1-206ENST00000527698 ALDH1L2Q3SY69 923 aa29.72■■■□□ 2.35
LRRK1-206ENST00000527698 C10orf71Q711Q0 1435 aa29.71■■■□□ 2.35
LRRK1-206ENST00000527698 HLFQ16534 295 aa29.71■■■□□ 2.35
LRRK1-206ENST00000527698 WWC3Q9ULE0 1092 aa29.71■■■□□ 2.35
LRRK1-206ENST00000527698 NIP7Q9Y221 180 aaKnown RBP eCLIP29.71■■■□□ 2.35
LRRK1-206ENST00000527698 SERPINB2P05120 415 aa29.7■■■□□ 2.35
LRRK1-206ENST00000527698 BICDL1Q6ZP65 573 aa29.7■■■□□ 2.35
LRRK1-206ENST00000527698 RIC3Q7Z5B4 369 aa29.7■■■□□ 2.35
LRRK1-206ENST00000527698 PHAXQ9H814 394 aaKnown RBP29.7■■■□□ 2.35
LRRK1-206ENST00000527698 NRXN2Q9P2S2 1712 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 DDR1Q08345 913 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 PARP10Q53GL7 1025 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 TPTE2Q6XPS3 522 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 NYXQ9GZU5 481 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 ANKRD36CQ5JPF3 1778 aa29.69■■■□□ 2.34
LRRK1-206ENST00000527698 AFDNP55196 1824 aaKnown RBP29.68■■■□□ 2.34
LRRK1-206ENST00000527698 BRCA1P38398 1863 aaKnown RBP29.68■■■□□ 2.34
LRRK1-206ENST00000527698 TCIRG1Q13488 830 aa29.68■■■□□ 2.34
LRRK1-206ENST00000527698 ZNF34Q8IZ26 560 aa29.68■■■□□ 2.34
LRRK1-206ENST00000527698 KSR2Q6VAB6 950 aa29.67■■■□□ 2.34
LRRK1-206ENST00000527698 ZNF526Q8TF50 670 aaPredicted RBP29.67■■■□□ 2.34
LRRK1-206ENST00000527698 NPHP1O15259 732 aa29.66■■■□□ 2.34
LRRK1-206ENST00000527698 FLIIQ13045 1269 aa29.66■■■□□ 2.34
LRRK1-206ENST00000527698 PPP1R42Q7Z4L9 355 aa29.66■■■□□ 2.34
LRRK1-206ENST00000527698 NBPF5PQ86XG9 351 aaPredicted RBP29.66■■■□□ 2.34
LRRK1-206ENST00000527698 ARFGEF2Q9Y6D5 1785 aa29.66■■■□□ 2.34
LRRK1-206ENST00000527698 IBTKQ9P2D0 1353 aaPredicted RBP29.65■■■□□ 2.34
LRRK1-206ENST00000527698 TCERG1O14776 1098 aaKnown RBP29.65■■■□□ 2.34
LRRK1-206ENST00000527698 PDZRN3Q9UPQ7 1066 aa29.65■■■□□ 2.34
LRRK1-206ENST00000527698 HSPA6P17066 643 aa29.64■■■□□ 2.34
LRRK1-206ENST00000527698 TRIM28Q13263 835 aaKnown RBP29.64■■■□□ 2.34
LRRK1-206ENST00000527698 CNBD1Q8NA66 436 aa29.64■■■□□ 2.34
LRRK1-206ENST00000527698 RNF123Q5XPI4 1314 aa29.64■■■□□ 2.34
LRRK1-206ENST00000527698 ST5P78524 1137 aa29.63■■■□□ 2.33
LRRK1-206ENST00000527698 FKBP5Q13451 457 aaPredicted RBP29.63■■■□□ 2.33
LRRK1-206ENST00000527698 BRPF1P55201 1214 aaPredicted RBP29.62■■■□□ 2.33
LRRK1-206ENST00000527698 NEXNQ0ZGT2 675 aa29.62■■■□□ 2.33
LRRK1-206ENST00000527698 ARFGEF1Q9Y6D6 1849 aa29.61■■■□□ 2.33
LRRK1-206ENST00000527698 A0A0G2JLW4 131 aa29.61■■■□□ 2.33
LRRK1-206ENST00000527698 PI4KAP2A4QPH2 592 aa29.61■■■□□ 2.33
LRRK1-206ENST00000527698 GTF2E1P29083 439 aaPredicted RBP29.61■■■□□ 2.33
LRRK1-206ENST00000527698 PI4KAP1Q8N8J0 262 aa29.61■■■□□ 2.33
LRRK1-206ENST00000527698 METTL22Q9BUU2 404 aaPredicted RBP29.61■■■□□ 2.33
LRRK1-206ENST00000527698 BCS1LQ9Y276 419 aa29.61■■■□□ 2.33
LRRK1-206ENST00000527698 G2E3Q7L622 706 aa29.6■■■□□ 2.33
LRRK1-206ENST00000527698 SSH1Q8WYL5 1049 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms