RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 XAGE3Q8WTP9 111 aa13.44□□□□□ -0.26
UBQLN1-204ENST00000527373 HYPKQ9NX55 129 aa13.44□□□□□ -0.26
UBQLN1-204ENST00000527373 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
UBQLN1-204ENST00000527373 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
UBQLN1-204ENST00000527373 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
UBQLN1-204ENST00000527373 TTLL7Q6ZT98 887 aa13.43□□□□□ -0.26
UBQLN1-204ENST00000527373 SLC16A10Q8TF71 515 aa13.42□□□□□ -0.26
UBQLN1-204ENST00000527373 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
UBQLN1-204ENST00000527373 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
UBQLN1-204ENST00000527373 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
UBQLN1-204ENST00000527373 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
UBQLN1-204ENST00000527373 USP42Q9H9J4 1324 aaKnown RBP13.41□□□□□ -0.26
UBQLN1-204ENST00000527373 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
UBQLN1-204ENST00000527373 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
UBQLN1-204ENST00000527373 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
UBQLN1-204ENST00000527373 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 GYS1P13807 737 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 FKBP8Q14318 412 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 G2E3Q7L622 706 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
UBQLN1-204ENST00000527373 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 POLD1P28340 1107 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 LRP10Q7Z4F1 713 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
UBQLN1-204ENST00000527373 FLIIQ13045 1269 aa13.38□□□□□ -0.27
UBQLN1-204ENST00000527373 HLFQ16534 295 aa13.38□□□□□ -0.27
UBQLN1-204ENST00000527373 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
UBQLN1-204ENST00000527373 MRPL50Q8N5N7 158 aaKnown RBP13.38□□□□□ -0.27
UBQLN1-204ENST00000527373 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 NPHP1O15259 732 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 MMP10P09238 476 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 GPTP24298 496 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 TBC1D9BQ66K14 1250 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 PLBD2Q8NHP8 589 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 PARP3Q9Y6F1 533 aa13.37□□□□□ -0.27
UBQLN1-204ENST00000527373 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 SETDB2Q96T68 719 aa13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
UBQLN1-204ENST00000527373 CACNA1FO60840 1977 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 PI4KAP2A4QPH2 592 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 BCAR3O75815 825 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 POLA2Q14181 598 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 NFIXQ14938 502 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 GIGYF2Q6Y7W6 1299 aaKnown RBP13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
UBQLN1-204ENST00000527373 F6X3S4 739 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 MYD88Q99836 296 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 RCAN3Q9UKA8 241 aa13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
UBQLN1-204ENST00000527373 SERPINB2P05120 415 aa13.33□□□□□ -0.28
UBQLN1-204ENST00000527373 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
UBQLN1-204ENST00000527373 TM4SF1P30408 202 aa13.33□□□□□ -0.28
UBQLN1-204ENST00000527373 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
UBQLN1-204ENST00000527373 DNAAF4Q8WXU2 420 aa13.33□□□□□ -0.28
UBQLN1-204ENST00000527373 IPO8O15397 1037 aaKnown RBP13.32□□□□□ -0.28
UBQLN1-204ENST00000527373 DDR1Q08345 913 aa13.32□□□□□ -0.28
UBQLN1-204ENST00000527373 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
UBQLN1-204ENST00000527373 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
UBQLN1-204ENST00000527373 NUP98P52948 1817 aa13.32□□□□□ -0.28
UBQLN1-204ENST00000527373 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 RGL2O15211 777 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 PTGER2P43116 358 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 PPP1R42Q7Z4L9 355 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 PTPRCP08575 1304 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 ADCY9O60503 1353 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 SCN7AQ01118 1682 aa13.31□□□□□ -0.28
UBQLN1-204ENST00000527373 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 PARP10Q53GL7 1025 aa13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 TPTE2Q6XPS3 522 aa13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
UBQLN1-204ENST00000527373 BRPF1P55201 1214 aaPredicted RBP13.29□□□□□ -0.28
UBQLN1-204ENST00000527373 ST5P78524 1137 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms