RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 JMYQ8N9B5 988 aa17.63■□□□□ 0.41
CAPN1-207ENST00000527189 THUMPD2Q9BTF0 503 aaKnown RBP17.63■□□□□ 0.41
CAPN1-207ENST00000527189 NPHP1O15259 732 aa17.62■□□□□ 0.41
CAPN1-207ENST00000527189 HTRA3P83110 453 aa17.62■□□□□ 0.41
CAPN1-207ENST00000527189 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 TOMM70O94826 608 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
CAPN1-207ENST00000527189 WDR43Q15061 677 aaKnown RBP eCLIP17.6■□□□□ 0.41
CAPN1-207ENST00000527189 NBPF5PQ86XG9 351 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-207ENST00000527189 ZNF622Q969S3 477 aaKnown RBP eCLIP17.6■□□□□ 0.41
CAPN1-207ENST00000527189 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
CAPN1-207ENST00000527189 PRKRIP1Q9H875 184 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-207ENST00000527189 RNF181Q9P0P0 153 aa17.6■□□□□ 0.41
CAPN1-207ENST00000527189 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
CAPN1-207ENST00000527189 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
CAPN1-207ENST00000527189 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
CAPN1-207ENST00000527189 BCORQ6W2J9 1755 aa17.6■□□□□ 0.41
CAPN1-207ENST00000527189 LMNB1P20700 586 aa17.59■□□□□ 0.41
CAPN1-207ENST00000527189 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
CAPN1-207ENST00000527189 CNKSR1Q969H4 720 aa17.59■□□□□ 0.41
CAPN1-207ENST00000527189 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
CAPN1-207ENST00000527189 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
CAPN1-207ENST00000527189 SLC34A2O95436 690 aa17.58■□□□□ 0.4
CAPN1-207ENST00000527189 SRGNP10124 158 aa17.58■□□□□ 0.4
CAPN1-207ENST00000527189 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-207ENST00000527189 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
CAPN1-207ENST00000527189 KLRG2A4D1S0 409 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-207ENST00000527189 CCDC24Q8N4L8 307 aa17.57■□□□□ 0.4
CAPN1-207ENST00000527189 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
CAPN1-207ENST00000527189 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
CAPN1-207ENST00000527189 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
CAPN1-207ENST00000527189 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 HLFQ16534 295 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 KIF6Q6ZMV9 814 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 NMRK2Q9NPI5 230 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 SBF1O95248 1867 aa17.56■□□□□ 0.4
CAPN1-207ENST00000527189 NYXQ9GZU5 481 aa17.55■□□□□ 0.4
CAPN1-207ENST00000527189 NFKBIEO00221 500 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 CHL1O00533 1208 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 C21orf2O43822 256 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 MYL6BP14649 208 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 NPR1P16066 1061 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 RASSF7Q02833 373 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 CCDC146Q8IYE0 955 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
CAPN1-207ENST00000527189 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
CAPN1-207ENST00000527189 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-207ENST00000527189 TRIM35Q9UPQ4 493 aa17.53■□□□□ 0.4
CAPN1-207ENST00000527189 ALDH1B1P30837 517 aa17.52■□□□□ 0.4
CAPN1-207ENST00000527189 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
CAPN1-207ENST00000527189 TTLL7Q6ZT98 887 aa17.52■□□□□ 0.4
CAPN1-207ENST00000527189 GLTPD2A6NH11 291 aa17.51■□□□□ 0.39
CAPN1-207ENST00000527189 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
CAPN1-207ENST00000527189 PDIA6Q15084 440 aa17.51■□□□□ 0.39
CAPN1-207ENST00000527189 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
CAPN1-207ENST00000527189 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
CAPN1-207ENST00000527189 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-207ENST00000527189 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
CAPN1-207ENST00000527189 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
CAPN1-207ENST00000527189 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
CAPN1-207ENST00000527189 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
CAPN1-207ENST00000527189 IBTKQ9P2D0 1353 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-207ENST00000527189 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
CAPN1-207ENST00000527189 FAM177BA6PVY3 158 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 HOXB7P09629 217 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 ZBTB3Q9H5J0 574 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 RRAGCQ9HB90 399 aa17.49■□□□□ 0.39
CAPN1-207ENST00000527189 CRY2Q49AN0 593 aa17.48■□□□□ 0.39
CAPN1-207ENST00000527189 PPP1R42Q7Z4L9 355 aa17.48■□□□□ 0.39
CAPN1-207ENST00000527189 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
CAPN1-207ENST00000527189 NUP98P52948 1817 aa17.48■□□□□ 0.39
CAPN1-207ENST00000527189 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
CAPN1-207ENST00000527189 SLX4Q8IY92 1834 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-207ENST00000527189 FSTL1Q12841 308 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
CAPN1-207ENST00000527189 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
CAPN1-207ENST00000527189 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
CAPN1-207ENST00000527189 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.39
CAPN1-207ENST00000527189 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
CAPN1-207ENST00000527189 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
CAPN1-207ENST00000527189 SUSD4Q5VX71 490 aa17.46■□□□□ 0.39
CAPN1-207ENST00000527189 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
CAPN1-207ENST00000527189 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.38
CAPN1-207ENST00000527189 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
CAPN1-207ENST00000527189 GPTP24298 496 aa17.45■□□□□ 0.38
CAPN1-207ENST00000527189 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-207ENST00000527189 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms