RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 RALYLQ86SE5 291 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 FSIP1Q8NA03 581 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 MYD88Q99836 296 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 CCDC94Q9BW85 323 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 ECHDC1Q9NTX5 307 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 ERCC6L2Q5T890 1561 aa8.18□□□□□ -1.1
TGFBR3-207ENST00000525962 ADCY10Q96PN6 1610 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 KCNQ3O43525 872 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 NMIQ13287 307 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 CFAP100Q494V2 611 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 GTF3C6Q969F1 213 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 EYA1Q99502 592 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 KLHL10Q6JEL2 608 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 NCOA5Q9HCD5 579 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 PLCH2O75038 1416 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 CEP135Q66GS9 1140 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 CCAR1Q8IX12 1150 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 PPP6R1Q9UPN7 881 aa8.17□□□□□ -1.1
TGFBR3-207ENST00000525962 PTPRCP08575 1304 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 GOLIM4O00461 696 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 RXRAP19793 462 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 MARCKSP29966 332 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 AOPEPQ8N6M6 819 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 NOC3LQ8WTT2 800 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 PATL2C9JE40 543 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 IBSPP21815 317 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 TRIM29Q14134 588 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 LGR6Q9HBX8 967 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 ARGLU1Q9NWB6 273 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 NPC1L1Q9UHC9 1359 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 MCM5P33992 734 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 TRDNQ13061 729 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 UBE3BQ7Z3V4 1068 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 FAM200AQ8TCP9 573 aa8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 FTOQ9C0B1 505 aaKnown RBP eCLIP8.16□□□□□ -1.1
TGFBR3-207ENST00000525962 PPARDQ03181 441 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 ARID5BQ14865 1188 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 CPLX2Q6PUV4 134 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 RUFY3Q7L099 469 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 MYRIPQ8NFW9 859 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 RAPGEF4Q8WZA2 1011 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 NAT10Q9H0A0 1025 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 SYNMO15061 1565 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 RTL1A6NKG5 1358 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 CEP57L1Q8IYX8 460 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 ZSCAN31Q96LW9 406 aaPredicted RBP8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 CD109Q6YHK3 1445 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 ABCC4O15439 1325 aa8.15□□□□□ -1.1
TGFBR3-207ENST00000525962 DUOX2Q9NRD8 1548 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 ITSN2Q9NZM3 1697 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 A0A1B0GVL5 298 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 CHL1O00533 1208 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 FAM193AP78312 1265 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 ME3Q16798 604 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 Q6ZUG5 572 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 UBXN4Q92575 508 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 CBX8Q9HC52 389 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 ABCA8O94911 1581 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 MAP3K19Q56UN5 1328 aa8.15□□□□□ -1.11
TGFBR3-207ENST00000525962 SFPQP23246 707 aaKnown RBP eCLIP8.14□□□□□ -1.112e-6■■□□□ 13.1
TGFBR3-207ENST00000525962 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 CREB3L3Q68CJ9 461 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 SCAND2PQ9GZW5 306 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 IL25Q9H293 177 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 DNAI1Q9UI46 699 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 CCDC66A2RUB6 948 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 GPS2Q13227 327 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 SEC62Q99442 399 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 CLSTN1O94985 981 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 AKAP17AQ02040 695 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 SLFNL1Q499Z3 407 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 SYT10Q6XYQ8 523 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 TTC6Q86TZ1 520 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 KIF18AQ8NI77 898 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 NUP133Q8WUM0 1156 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 CCDC34Q96HJ3 373 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 USP44Q9H0E7 712 aa8.14□□□□□ -1.11
TGFBR3-207ENST00000525962 NR1I2O75469 434 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ELF2Q15723 593 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ATP2B3Q16720 1220 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 CFAP45Q9UL16 551 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 AMOTL2Q9Y2J4 779 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ATP10AO60312 1499 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 CCDC69A6NI79 296 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 HS1BP3Q53T59 392 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 OLFM4Q6UX06 510 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 NEK1Q96PY6 1258 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 ZBTB22O15209 634 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 SGSM2O43147 1006 aa8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 IDH1O75874 414 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-207ENST00000525962 TSR1Q2NL82 804 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms