RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 MYH16Q9H6N6 1097 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 CHPF2Q9P2E5 772 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 PARP3Q9Y6F1 533 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 C10orf71Q711Q0 1435 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 NUP98P52948 1817 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 MAP3K15Q6ZN16 1313 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 ANXA1P04083 346 aa22.28■■□□□ 1.16
PKP3-203ENST00000525642 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
PKP3-203ENST00000525642 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
PKP3-203ENST00000525642 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
PKP3-203ENST00000525642 HLFQ16534 295 aa22.27■■□□□ 1.16
PKP3-203ENST00000525642 TWISTNBQ3B726 338 aaPredicted RBP22.27■■□□□ 1.16
PKP3-203ENST00000525642 KIAA1551Q9HCM1 1747 aa22.27■■□□□ 1.16
PKP3-203ENST00000525642 E9PSI1 815 aa22.26■■□□□ 1.15
PKP3-203ENST00000525642 VAMP4O75379 141 aa22.26■■□□□ 1.15
PKP3-203ENST00000525642 EXOSC9Q06265 439 aaKnown RBP22.26■■□□□ 1.15
PKP3-203ENST00000525642 HYPKQ9NX55 129 aa22.26■■□□□ 1.15
PKP3-203ENST00000525642 ZNF652Q9Y2D9 606 aa22.26■■□□□ 1.15
PKP3-203ENST00000525642 ATP10DQ9P241 1426 aa22.25■■□□□ 1.15
PKP3-203ENST00000525642 CCDC30Q5VVM6 783 aa22.25■■□□□ 1.15
PKP3-203ENST00000525642 GIGYF2Q6Y7W6 1299 aaKnown RBP22.25■■□□□ 1.15
PKP3-203ENST00000525642 COPS6Q7L5N1 327 aa22.25■■□□□ 1.15
PKP3-203ENST00000525642 SERPINB2P05120 415 aa22.24■■□□□ 1.15
PKP3-203ENST00000525642 KIF6Q6ZMV9 814 aa22.24■■□□□ 1.15
PKP3-203ENST00000525642 XAGE3Q8WTP9 111 aa22.24■■□□□ 1.15
PKP3-203ENST00000525642 CARMIL3Q8ND23 1372 aa22.24■■□□□ 1.15
PKP3-203ENST00000525642 NLGN2Q8NFZ4 835 aa22.23■■□□□ 1.15
PKP3-203ENST00000525642 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
PKP3-203ENST00000525642 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
PKP3-203ENST00000525642 SETDB2Q96T68 719 aa22.22■■□□□ 1.15
PKP3-203ENST00000525642 TGFB2P61812 414 aa22.21■■□□□ 1.15
PKP3-203ENST00000525642 CDCA7LQ96GN5 454 aa22.21■■□□□ 1.15
PKP3-203ENST00000525642 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
PKP3-203ENST00000525642 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
PKP3-203ENST00000525642 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
PKP3-203ENST00000525642 PHAXQ9H814 394 aaKnown RBP22.2■■□□□ 1.14
PKP3-203ENST00000525642 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
PKP3-203ENST00000525642 NIP7Q9Y221 180 aaKnown RBP eCLIP22.19■■□□□ 1.14
PKP3-203ENST00000525642 PXDNLA1KZ92 1463 aa22.19■■□□□ 1.14
PKP3-203ENST00000525642 IBTKQ9P2D0 1353 aaPredicted RBP22.18■■□□□ 1.14
PKP3-203ENST00000525642 AIMP1Q12904 312 aaKnown RBP22.18■■□□□ 1.14
PKP3-203ENST00000525642 PRR5LQ6MZQ0 368 aa22.18■■□□□ 1.14
PKP3-203ENST00000525642 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
PKP3-203ENST00000525642 ANKRD31Q8N7Z5 1873 aa22.17■■□□□ 1.14
PKP3-203ENST00000525642 UBN2Q6ZU65 1347 aa22.17■■□□□ 1.14
PKP3-203ENST00000525642 KLHL34Q8N239 644 aa22.17■■□□□ 1.14
PKP3-203ENST00000525642 BRCA1P38398 1863 aaKnown RBP22.17■■□□□ 1.14
PKP3-203ENST00000525642 KCNA3P22001 575 aa22.16■■□□□ 1.14
PKP3-203ENST00000525642 TCIRG1Q13488 830 aa22.16■■□□□ 1.14
PKP3-203ENST00000525642 ARFGEF2Q9Y6D5 1785 aa22.16■■□□□ 1.14
PKP3-203ENST00000525642 N4BP2Q86UW6 1770 aaPredicted RBP22.15■■□□□ 1.14
PKP3-203ENST00000525642 HNRNPUQ00839 825 aaKnown RBP eCLIP22.15■■□□□ 1.14
PKP3-203ENST00000525642 HSP90AB3PQ58FF7 597 aa22.15■■□□□ 1.14
PKP3-203ENST00000525642 STK31Q9BXU1 1019 aa22.15■■□□□ 1.14
PKP3-203ENST00000525642 SLC4A2P04920 1241 aa22.14■■□□□ 1.13
PKP3-203ENST00000525642 PARP10Q53GL7 1025 aa22.14■■□□□ 1.13
PKP3-203ENST00000525642 TPTE2Q6XPS3 522 aa22.14■■□□□ 1.13
PKP3-203ENST00000525642 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
PKP3-203ENST00000525642 BRIP1Q9BX63 1249 aa22.14■■□□□ 1.13
PKP3-203ENST00000525642 KLRG2A4D1S0 409 aaPredicted RBP22.13■■□□□ 1.13
PKP3-203ENST00000525642 TRIM28Q13263 835 aaKnown RBP22.13■■□□□ 1.13
PKP3-203ENST00000525642 G2E3Q7L622 706 aa22.13■■□□□ 1.13
PKP3-203ENST00000525642 CNBD1Q8NA66 436 aa22.13■■□□□ 1.13
PKP3-203ENST00000525642 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
PKP3-203ENST00000525642 RIC1Q4ADV7 1423 aa22.13■■□□□ 1.13
PKP3-203ENST00000525642 DLEC1Q9Y238 1755 aa22.12■■□□□ 1.13
PKP3-203ENST00000525642 ZBED9Q6R2W3 1325 aa22.12■■□□□ 1.13
PKP3-203ENST00000525642 TCERG1O14776 1098 aaKnown RBP22.12■■□□□ 1.13
PKP3-203ENST00000525642 DPEP1P16444 411 aa22.12■■□□□ 1.13
PKP3-203ENST00000525642 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
PKP3-203ENST00000525642 NBPF5PQ86XG9 351 aaPredicted RBP22.12■■□□□ 1.13
PKP3-203ENST00000525642 A0A0G2JLW4 131 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 NTSR2O95665 410 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 CT47B1P0C2W7 299 aaPredicted RBP22.11■■□□□ 1.13
PKP3-203ENST00000525642 GPTP24298 496 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 NLRP10Q86W26 655 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 NYXQ9GZU5 481 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 PDZRN3Q9UPQ7 1066 aa22.11■■□□□ 1.13
PKP3-203ENST00000525642 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
PKP3-203ENST00000525642 RNF123Q5XPI4 1314 aa22.1■■□□□ 1.13
PKP3-203ENST00000525642 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
PKP3-203ENST00000525642 ADCY9O60503 1353 aa22.1■■□□□ 1.13
PKP3-203ENST00000525642 DDX58O95786 925 aaKnown RBP22.09■■□□□ 1.13
PKP3-203ENST00000525642 ST5P78524 1137 aa22.09■■□□□ 1.13
PKP3-203ENST00000525642 FLIIQ13045 1269 aa22.09■■□□□ 1.13
PKP3-203ENST00000525642 PPP1R42Q7Z4L9 355 aa22.09■■□□□ 1.13
PKP3-203ENST00000525642 METTL22Q9BUU2 404 aaPredicted RBP22.09■■□□□ 1.13
PKP3-203ENST00000525642 PDE6BP35913 854 aa22.08■■□□□ 1.13
PKP3-203ENST00000525642 SLC10A5Q5PT55 438 aa22.08■■□□□ 1.13
PKP3-203ENST00000525642 RIC3Q7Z5B4 369 aa22.08■■□□□ 1.13
PKP3-203ENST00000525642 COL11A2P13942 1736 aaPredicted RBP22.08■■□□□ 1.12
PKP3-203ENST00000525642 UTRNP46939 3433 aa22.07■■□□□ 1.12
PKP3-203ENST00000525642 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
PKP3-203ENST00000525642 YBX3P16989 372 aaKnown RBP eCLIP22.07■■□□□ 1.12
PKP3-203ENST00000525642 CHRNA5P30532 468 aa22.07■■□□□ 1.12
PKP3-203ENST00000525642 CCDC24Q8N4L8 307 aa22.07■■□□□ 1.12
PKP3-203ENST00000525642 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
PKP3-203ENST00000525642 ALDH1L2Q3SY69 923 aa22.06■■□□□ 1.12
PKP3-203ENST00000525642 MRPL50Q8N5N7 158 aaKnown RBP22.06■■□□□ 1.12
PKP3-203ENST00000525642 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms