RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CALD1Q05682 793 aaKnown RBP8.41□□□□□ -1.06
CD44-214ENST00000525211 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
CD44-214ENST00000525211 TWISTNBQ3B726 338 aaPredicted RBP8.41□□□□□ -1.06
CD44-214ENST00000525211 BCL2L13Q9BXK5 485 aa8.41□□□□□ -1.06
CD44-214ENST00000525211 PCDHB8Q9UN66 801 aa8.41□□□□□ -1.06
CD44-214ENST00000525211 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
CD44-214ENST00000525211 TUBGCP6Q96RT7 1819 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 C4BP0C0L5 1744 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.06
CD44-214ENST00000525211 PHF14O94880 888 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
CD44-214ENST00000525211 SLC27A3Q5K4L6 730 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 MYH16Q9H6N6 1097 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 PHAXQ9H814 394 aaKnown RBP8.4□□□□□ -1.06
CD44-214ENST00000525211 CCDC87Q9NVE4 849 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 CHPF2Q9P2E5 772 aa8.4□□□□□ -1.06
CD44-214ENST00000525211 SRP68Q9UHB9 627 aaKnown RBP8.4□□□□□ -1.06
CD44-214ENST00000525211 RGPD3A6NKT7 1758 aaPredicted RBP8.4□□□□□ -1.07
CD44-214ENST00000525211 RGPD4Q7Z3J3 1758 aa8.4□□□□□ -1.07
CD44-214ENST00000525211 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
CD44-214ENST00000525211 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
CD44-214ENST00000525211 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 PSDA5PKW4 1024 aaPredicted RBP8.39□□□□□ -1.07
CD44-214ENST00000525211 GNPATO15228 680 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 BCAR3O75815 825 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 MYL6BP14649 208 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 EIF5P55010 431 aaKnown RBP8.39□□□□□ -1.07
CD44-214ENST00000525211 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 COL23A1Q86Y22 540 aaPredicted RBP8.39□□□□□ -1.07
CD44-214ENST00000525211 SSH1Q8WYL5 1049 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
CD44-214ENST00000525211 CNTNAP4Q9C0A0 1308 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 RPS6KA4O75676 772 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 RARSP54136 660 aaKnown RBP8.38□□□□□ -1.07
CD44-214ENST00000525211 R3HDM1Q15032 1099 aaKnown RBP8.38□□□□□ -1.07
CD44-214ENST00000525211 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
CD44-214ENST00000525211 MRPL50Q8N5N7 158 aaKnown RBP8.38□□□□□ -1.07
CD44-214ENST00000525211 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
CD44-214ENST00000525211 BCL2L12Q9HB09 334 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 UBR3Q6ZT12 1888 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 LAMB4A4D0S4 1761 aa8.38□□□□□ -1.07
CD44-214ENST00000525211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
CD44-214ENST00000525211 AIMP1Q12904 312 aaKnown RBP8.37□□□□□ -1.07
CD44-214ENST00000525211 PDAP1Q13442 181 aaKnown RBP8.37□□□□□ -1.07
CD44-214ENST00000525211 HLFQ16534 295 aa8.37□□□□□ -1.07
CD44-214ENST00000525211 ZNF579Q8NAF0 562 aaKnown RBP8.37□□□□□ -1.07
CD44-214ENST00000525211 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
CD44-214ENST00000525211 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
CD44-214ENST00000525211 STARD3NLO95772 234 aa8.36□□□□□ -1.07
CD44-214ENST00000525211 HOXB7P09629 217 aa8.36□□□□□ -1.07
CD44-214ENST00000525211 MSL1Q68DK7 614 aa8.36□□□□□ -1.07
CD44-214ENST00000525211 COPS6Q7L5N1 327 aa8.36□□□□□ -1.07
CD44-214ENST00000525211 AK7Q96M32 723 aa8.36□□□□□ -1.07
CD44-214ENST00000525211 DDX21Q9NR30 783 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD44-214ENST00000525211 COL15A1P39059 1388 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 F6X3S4 739 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 MAP3K13O43283 966 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 PLIN1O60240 522 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 CAMTA2O94983 1202 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 USPL1Q5W0Q7 1092 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 KIF12Q96FN5 646 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
CD44-214ENST00000525211 STK32BQ9NY57 414 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 ADCY9O60503 1353 aa8.35□□□□□ -1.07
CD44-214ENST00000525211 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 GYS1P13807 737 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 IL6STP40189 918 aaPredicted RBP8.34□□□□□ -1.07
CD44-214ENST00000525211 PSEN1P49768 467 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 CCDC30Q5VVM6 783 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
CD44-214ENST00000525211 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
CD44-214ENST00000525211 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
CD44-214ENST00000525211 CASZ1Q86V15 1759 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 RLBP1P12271 317 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 FLIIQ13045 1269 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 C20orf194Q5TEA3 1177 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 TBC1D9BQ66K14 1250 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 SYNE4Q8N205 404 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 JARID2Q92833 1246 aaPredicted RBP8.33□□□□□ -1.08
CD44-214ENST00000525211 ARXQ96QS3 562 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
CD44-214ENST00000525211 DBF4Q9UBU7 674 aaPredicted RBP8.33□□□□□ -1.08
CD44-214ENST00000525211 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
CD44-214ENST00000525211 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
CD44-214ENST00000525211 PI4KAP2A4QPH2 592 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
CD44-214ENST00000525211 SSFA2P28290 1259 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 DDR1Q08345 913 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 CCDC24Q8N4L8 307 aa8.32□□□□□ -1.08
CD44-214ENST00000525211 PI4KAP1Q8N8J0 262 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms