RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 ANXA1P04083 346 aa16.77■□□□□ 0.28
TRAPPC4-205ENST00000525079 DALRD3Q5D0E6 543 aaKnown RBP16.77■□□□□ 0.28
TRAPPC4-205ENST00000525079 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
TRAPPC4-205ENST00000525079 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRAPPC4-205ENST00000525079 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
TRAPPC4-205ENST00000525079 CNBD1Q8NA66 436 aa16.76■□□□□ 0.27
TRAPPC4-205ENST00000525079 CFAP44Q96MT7 982 aa16.76■□□□□ 0.27
TRAPPC4-205ENST00000525079 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
TRAPPC4-205ENST00000525079 ANKRD31Q8N7Z5 1873 aa16.76■□□□□ 0.27
TRAPPC4-205ENST00000525079 H0YIN7 160 aa16.75■□□□□ 0.27
TRAPPC4-205ENST00000525079 PDIA6Q15084 440 aa16.75■□□□□ 0.27
TRAPPC4-205ENST00000525079 KIF6Q6ZMV9 814 aa16.75■□□□□ 0.27
TRAPPC4-205ENST00000525079 NBPF5PQ86XG9 351 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC4-205ENST00000525079 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
TRAPPC4-205ENST00000525079 MAP3K15Q6ZN16 1313 aa16.74■□□□□ 0.27
TRAPPC4-205ENST00000525079 UTRNP46939 3433 aa16.74■□□□□ 0.27
TRAPPC4-205ENST00000525079 PDE6BP35913 854 aa16.74■□□□□ 0.27
TRAPPC4-205ENST00000525079 ZNF622Q969S3 477 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAPPC4-205ENST00000525079 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
TRAPPC4-205ENST00000525079 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 GOLGB1Q14789 3259 aaKnown RBP16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 ERVV-1B6SEH8 477 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 ZNF853P0CG23 659 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 ST5P78524 1137 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 LRP10Q7Z4F1 713 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 NUP98P52948 1817 aa16.73■□□□□ 0.27
TRAPPC4-205ENST00000525079 GPTP24298 496 aa16.72■□□□□ 0.27
TRAPPC4-205ENST00000525079 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
TRAPPC4-205ENST00000525079 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
TRAPPC4-205ENST00000525079 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
TRAPPC4-205ENST00000525079 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 RGL2O15211 777 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 GNAI1P63096 354 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 HDGFL1Q5TGJ6 251 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 ZNF526Q8TF50 670 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 SALL2Q9Y467 1007 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-205ENST00000525079 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
TRAPPC4-205ENST00000525079 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-205ENST00000525079 NUTM1Q86Y26 1132 aa16.69■□□□□ 0.26
TRAPPC4-205ENST00000525079 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRAPPC4-205ENST00000525079 UBN2Q6ZU65 1347 aa16.69■□□□□ 0.26
TRAPPC4-205ENST00000525079 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
TRAPPC4-205ENST00000525079 WWC1Q8IX03 1113 aa16.68■□□□□ 0.26
TRAPPC4-205ENST00000525079 ZNF34Q8IZ26 560 aa16.68■□□□□ 0.26
TRAPPC4-205ENST00000525079 PDZRN3Q9UPQ7 1066 aa16.68■□□□□ 0.26
TRAPPC4-205ENST00000525079 ADCY9O60503 1353 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 HOXB7P09629 217 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 SRGNP10124 158 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 RASSF7Q02833 373 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 C8orf58Q8NAV2 365 aa16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 TSR2Q969E8 191 aaKnown RBP16.67■□□□□ 0.26
TRAPPC4-205ENST00000525079 C21orf2O43822 256 aa16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 NYXQ9GZU5 481 aa16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 DBF4Q9UBU7 674 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-205ENST00000525079 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
TRAPPC4-205ENST00000525079 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
TRAPPC4-205ENST00000525079 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
TRAPPC4-205ENST00000525079 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
TRAPPC4-205ENST00000525079 ABCC12Q96J65 1359 aa16.64■□□□□ 0.26
TRAPPC4-205ENST00000525079 SLX4Q8IY92 1834 aa16.64■□□□□ 0.25
TRAPPC4-205ENST00000525079 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
TRAPPC4-205ENST00000525079 GPBP1L1Q9HC44 474 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC4-205ENST00000525079 TNRC6CQ9HCJ0 1690 aaKnown RBP16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 KLRG2A4D1S0 409 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 NTSR2O95665 410 aa16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 NPR1P16066 1061 aa16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 PRELPP51888 382 aa16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
TRAPPC4-205ENST00000525079 TCIRG1Q13488 830 aa16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 PARP10Q53GL7 1025 aa16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 HYPKQ9NX55 129 aa16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 SBF1O95248 1867 aa16.62■□□□□ 0.25
TRAPPC4-205ENST00000525079 NFKBIEO00221 500 aa16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 HSP90AB3PQ58FF7 597 aa16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 PLBD2Q8NHP8 589 aa16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
TRAPPC4-205ENST00000525079 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
TRAPPC4-205ENST00000525079 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 319.7 ms