RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 SERPINB2P05120 415 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 NECTIN2Q92692 538 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 CHPF2Q9P2E5 772 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
TTC39A-213ENST00000524442 ELL2O00472 640 aaPredicted RBP13.06□□□□□ -0.32
TTC39A-213ENST00000524442 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
TTC39A-213ENST00000524442 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
TTC39A-213ENST00000524442 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
TTC39A-213ENST00000524442 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
TTC39A-213ENST00000524442 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
TTC39A-213ENST00000524442 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
TTC39A-213ENST00000524442 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
TTC39A-213ENST00000524442 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
TTC39A-213ENST00000524442 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
TTC39A-213ENST00000524442 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
TTC39A-213ENST00000524442 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
TTC39A-213ENST00000524442 E9PSI1 815 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 ANXA1P04083 346 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 HLFQ16534 295 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 HSP90AB3PQ58FF7 597 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 XAGE3Q8WTP9 111 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
TTC39A-213ENST00000524442 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
TTC39A-213ENST00000524442 NRXN2Q9P2S2 1712 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
TTC39A-213ENST00000524442 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-213ENST00000524442 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-213ENST00000524442 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
TTC39A-213ENST00000524442 NPHP1O15259 732 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 ST5P78524 1137 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 EXOSC9Q06265 439 aaKnown RBP13.02□□□□□ -0.33
TTC39A-213ENST00000524442 GPR162Q16538 588 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 PARP10Q53GL7 1025 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
TTC39A-213ENST00000524442 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
TTC39A-213ENST00000524442 VAMP4O75379 141 aa13.01□□□□□ -0.33
TTC39A-213ENST00000524442 DDX58O95786 925 aaKnown RBP13.01□□□□□ -0.33
TTC39A-213ENST00000524442 PDE6BP35913 854 aa13.01□□□□□ -0.33
TTC39A-213ENST00000524442 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-213ENST00000524442 A0A0G2JLW4 131 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 DPEP1P16444 411 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 SLFN5Q08AF3 891 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 TCIRG1Q13488 830 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 PIM2Q9P1W9 311 aa13□□□□□ -0.33
TTC39A-213ENST00000524442 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
TTC39A-213ENST00000524442 H0YIN7 160 aa12.99□□□□□ -0.33
TTC39A-213ENST00000524442 GTF2E1P29083 439 aaPredicted RBP12.99□□□□□ -0.33
TTC39A-213ENST00000524442 PHAXQ9H814 394 aaKnown RBP12.99□□□□□ -0.33
TTC39A-213ENST00000524442 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
TTC39A-213ENST00000524442 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 KCNA3P22001 575 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 GPTP24298 496 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
TTC39A-213ENST00000524442 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
TTC39A-213ENST00000524442 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
TTC39A-213ENST00000524442 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
TTC39A-213ENST00000524442 NUP98P52948 1817 aa12.97□□□□□ -0.33
TTC39A-213ENST00000524442 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-213ENST00000524442 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-213ENST00000524442 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
TTC39A-213ENST00000524442 CHRNA5P30532 468 aa12.97□□□□□ -0.33
TTC39A-213ENST00000524442 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
TTC39A-213ENST00000524442 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
TTC39A-213ENST00000524442 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
TTC39A-213ENST00000524442 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
TTC39A-213ENST00000524442 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 NTSR2O95665 410 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 KSR2Q6VAB6 950 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 TTLL6Q8N841 843 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
TTC39A-213ENST00000524442 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.34
TTC39A-213ENST00000524442 SRGNP10124 158 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
TTC39A-213ENST00000524442 FLIIQ13045 1269 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 CDCA7LQ96GN5 454 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 METTL22Q9BUU2 404 aaPredicted RBP12.95□□□□□ -0.34
TTC39A-213ENST00000524442 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
TTC39A-213ENST00000524442 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
TTC39A-213ENST00000524442 NPR1P16066 1061 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms