RNA–Protein interactions for RNA: ENST00000524324.5

CA1-223, Transcript of carbonic anhydrase 1, human

TSL 2

Gene CA1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-223	ENST00000524324	MYL6B	P14649	208 aa		10.19	□□□□□ -0.78
CA1-223	ENST00000524324	PDIA6	Q15084	440 aa		10.19	□□□□□ -0.78
CA1-223	ENST00000524324	IFNL1	Q8IU54	200 aa		10.19	□□□□□ -0.78
CA1-223	ENST00000524324	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.19	□□□□□ -0.78
CA1-223	ENST00000524324	TAF1L	Q8IZX4	1826 aa		10.19	□□□□□ -0.78
CA1-223	ENST00000524324	MYH14	Q7Z406	1995 aa	Known RBP	10.18	□□□□□ -0.78
CA1-223	ENST00000524324	STARD3NL	O95772	234 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	PSEN1	P49768	467 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	HDGFL1	Q5TGJ6	251 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	SGIP1	Q9BQI5	828 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.18	□□□□□ -0.78
CA1-223	ENST00000524324	CCDC87	Q9NVE4	849 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	ZBTB1	Q9Y2K1	713 aa		10.18	□□□□□ -0.78
CA1-223	ENST00000524324	HAX1	O00165	279 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	GNPAT	O15228	680 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	PHF14	O94880	888 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	SLC15A2	Q16348	729 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	G2E3	Q7L622	706 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	BCL2L13	Q9BXK5	485 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	PHAX	Q9H814	394 aa	Known RBP	10.17	□□□□□ -0.78
CA1-223	ENST00000524324	CHPF2	Q9P2E5	772 aa		10.17	□□□□□ -0.78
CA1-223	ENST00000524324	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.17	□□□□□ -0.78
CA1-223	ENST00000524324	C4B	P0C0L5	1744 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	COL5A3	P25940	1745 aa	Predicted RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	NUP188	Q5SRE5	1749 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	RREB1	Q92766	1687 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	PSD	A5PKW4	1024 aa	Predicted RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	C19orf67	A6NJJ6	358 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	RPS6KA4	O75676	772 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	AIMP1	Q12904	312 aa	Known RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	RC3H1	Q5TC82	1133 aa	Known RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	LRP10	Q7Z4F1	713 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	COL23A1	Q86Y22	540 aa	Predicted RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	ARHGEF1	Q92888	912 aa	Known RBP	10.16	□□□□□ -0.78
CA1-223	ENST00000524324	AK7	Q96M32	723 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	ARX	Q96QS3	562 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	TFCP2L1	Q9NZI6	479 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	TBC1D2B	Q9UPU7	963 aa		10.16	□□□□□ -0.78
CA1-223	ENST00000524324	ZNF831	Q5JPB2	1677 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	BCAR3	O75815	825 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	R3HDM1	Q15032	1099 aa	Known RBP	10.15	□□□□□ -0.78
CA1-223	ENST00000524324	TTLL7	Q6ZT98	887 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	COPS6	Q7L5N1	327 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	SSH1	Q8WYL5	1049 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	STK32B	Q9NY57	414 aa		10.15	□□□□□ -0.78
CA1-223	ENST00000524324	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	RGPD4	Q7Z3J3	1758 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	CNTNAP4	Q9C0A0	1308 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	HOXB7	P09629	217 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	EIF5	P55010	431 aa	Known RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	TRAPPC3L	Q5T215	181 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	CCDC30	Q5VVM6	783 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	MRPL50	Q8N5N7	158 aa	Known RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	XAGE3	Q8WTP9	111 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	ZNF428	Q96B54	188 aa		10.14	□□□□□ -0.79
CA1-223	ENST00000524324	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	SRP68	Q9UHB9	627 aa	Known RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	RTCB	Q9Y3I0	505 aa	Known RBP	10.14	□□□□□ -0.79
CA1-223	ENST00000524324	SOS1	Q07889	1333 aa	Predicted RBP	10.13	□□□□□ -0.79
CA1-223	ENST00000524324	PNPLA7	Q6ZV29	1317 aa		10.13	□□□□□ -0.79
CA1-223	ENST00000524324	IL6ST	P40189	918 aa	Predicted RBP	10.13	□□□□□ -0.79
CA1-223	ENST00000524324	RARS	P54136	660 aa	Known RBP	10.13	□□□□□ -0.79
CA1-223	ENST00000524324	DBF4	Q9UBU7	674 aa	Predicted RBP	10.13	□□□□□ -0.79
CA1-223	ENST00000524324	TUBGCP6	Q96RT7	1819 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	CIC	Q96RK0	1608 aa	Predicted RBP	10.12	□□□□□ -0.79
CA1-223	ENST00000524324	LAMB4	A4D0S4	1761 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	HLF	Q16534	295 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	USPL1	Q5W0Q7	1092 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	TSHZ2	Q9NRE2	1034 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	TNN	Q9UQP3	1299 aa		10.12	□□□□□ -0.79
CA1-223	ENST00000524324	UBR3	Q6ZT12	1888 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	RFC4	P35249	363 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	DZIP3	Q86Y13	1208 aa	Known RBP	10.11	□□□□□ -0.79
CA1-223	ENST00000524324	STK31	Q9BXU1	1019 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	ZBTB3	Q9H5J0	574 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	BCL2L12	Q9HB09	334 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	HYPK	Q9NX55	129 aa		10.11	□□□□□ -0.79
CA1-223	ENST00000524324	NOB1	Q9ULX3	412 aa	Known RBP	10.11	□□□□□ -0.79
CA1-223	ENST00000524324	PLIN1	O60240	522 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	CAMTA2	O94983	1202 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	SSFA2	P28290	1259 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	MSL1	Q68DK7	614 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	SMC4	Q9NTJ3	1288 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	NARF	Q9UHQ1	456 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	COL15A1	P39059	1388 aa		10.1	□□□□□ -0.79
CA1-223	ENST00000524324	ERBB4	Q15303	1308 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324		F6X3S4	739 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	GTPBP6	O43824	516 aa	Predicted RBP	10.09	□□□□□ -0.79
CA1-223	ENST00000524324	ZBTB7A	O95365	584 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	FLII	Q13045	1269 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	ALDH1L2	Q3SY69	923 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	BICDL1	Q6ZP65	573 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	ANKRD13D	Q6ZTN6	518 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	FRAT1	Q92837	279 aa	Predicted RBP	10.09	□□□□□ -0.79
CA1-223	ENST00000524324	MS4A3	Q96HJ5	214 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324	RCAN3	Q9UKA8	241 aa		10.09	□□□□□ -0.79
CA1-223	ENST00000524324		A0A087WZG4	1122 aa		10.08	□□□□□ -0.8
CA1-223	ENST00000524324	PI4KAP2	A4QPH2	592 aa		10.08	□□□□□ -0.8
CA1-223	ENST00000524324	ZPR1	O75312	459 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms