RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 SSH3Q8TE77 659 aa14.37□□□□□ -0.11
SCUBE2-208ENST00000524317 OSBPL3Q9H4L5 887 aa14.37□□□□□ -0.11
SCUBE2-208ENST00000524317 HYPKQ9NX55 129 aa14.37□□□□□ -0.11
SCUBE2-208ENST00000524317 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
SCUBE2-208ENST00000524317 WDR17Q8IZU2 1322 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 SDSP20132 328 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 PDIA6Q15084 440 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 KSR2Q6VAB6 950 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 HSP90AB1P08238 724 aaKnown RBP14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 PDE1AP54750 535 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
SCUBE2-208ENST00000524317 SALL3Q9BXA9 1300 aa14.35□□□□□ -0.11
SCUBE2-208ENST00000524317 NFKBIBQ15653 356 aa14.35□□□□□ -0.11
SCUBE2-208ENST00000524317 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
SCUBE2-208ENST00000524317 ZNF496Q96IT1 587 aaPredicted RBP14.35□□□□□ -0.11
SCUBE2-208ENST00000524317 TOM1L2Q6ZVM7 507 aa14.35□□□□□ -0.11
SCUBE2-208ENST00000524317 HSP90AA1P07900 732 aaKnown RBP14.34□□□□□ -0.11
SCUBE2-208ENST00000524317 MRC1P22897 1456 aa14.34□□□□□ -0.11
SCUBE2-208ENST00000524317 SRGAP3O43295 1099 aa14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 ALDH1L1O75891 902 aa14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 PDE4DQ08499 809 aa14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 KIF2CQ99661 725 aa14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 ANTXR1Q9H6X2 564 aa14.33□□□□□ -0.11
SCUBE2-208ENST00000524317 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
SCUBE2-208ENST00000524317 TTC5Q8N0Z6 440 aa14.33□□□□□ -0.12
SCUBE2-208ENST00000524317 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
SCUBE2-208ENST00000524317 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 MX1P20591 662 aa14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 CABP4P57796 275 aa14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 TSHZ3Q63HK5 1081 aa14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 CACNA1FO60840 1977 aa14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 AIMP1Q12904 312 aaKnown RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
SCUBE2-208ENST00000524317 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 SURF6O75683 361 aaKnown RBP14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 LINS1Q8NG48 757 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 PCDH11XQ9BZA7 1347 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 PCDH11YQ9BZA8 1340 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 CASC1Q6TDU7 716 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 HSCBQ8IWL3 235 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 SNX21Q969T3 373 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 CARD10Q9BWT7 1032 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
SCUBE2-208ENST00000524317 MYL6BP14649 208 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 FGD1P98174 961 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 MTX1Q13505 466 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 STAP2Q9UGK3 403 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 IL1RAPL2Q9NP60 686 aa14.3□□□□□ -0.12
SCUBE2-208ENST00000524317 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 TRIM66O15016 1216 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 IL2RBP14784 551 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 RHPN1Q8TCX5 695 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 XAGE3Q8WTP9 111 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 USP26Q9BXU7 913 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 STRN4Q9NRL3 753 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 A0A0U1RQG5 324 aaPredicted RBP14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 GRM8O00222 908 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 COPS6Q7L5N1 327 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
SCUBE2-208ENST00000524317 UTYO14607 1347 aa14.28□□□□□ -0.12
SCUBE2-208ENST00000524317 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
SCUBE2-208ENST00000524317 SCN11AQ9UI33 1791 aa14.28□□□□□ -0.12
SCUBE2-208ENST00000524317 FRAT2O75474 233 aaPredicted RBP14.27□□□□□ -0.12
SCUBE2-208ENST00000524317 EVA1CP58658 441 aa14.27□□□□□ -0.12
SCUBE2-208ENST00000524317 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.12
SCUBE2-208ENST00000524317 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.12
SCUBE2-208ENST00000524317 HSP90AB4PQ58FF6 505 aa14.27□□□□□ -0.13
SCUBE2-208ENST00000524317 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.13
SCUBE2-208ENST00000524317 AOX1Q06278 1338 aa14.27□□□□□ -0.13
SCUBE2-208ENST00000524317 ERVV-2B6SEH9 535 aa14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 PIP4K2AP48426 406 aaPredicted RBP14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 KAZALD1Q96I82 304 aa14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 SUCLG2Q96I99 432 aa14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 METTL22Q9BUU2 404 aaPredicted RBP14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
SCUBE2-208ENST00000524317 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 ERC2O15083 957 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 REC8O95072 547 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 CD2BP2O95400 341 aaKnown RBP14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 PDE4CQ08493 712 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
SCUBE2-208ENST00000524317 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
SCUBE2-208ENST00000524317 GCKRQ14397 625 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms