RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
VEGFA-225ENST00000523950 TSR2Q969E8 191 aaKnown RBP16.23■□□□□ 0.19
VEGFA-225ENST00000523950 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
VEGFA-225ENST00000523950 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
VEGFA-225ENST00000523950 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
VEGFA-225ENST00000523950 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
VEGFA-225ENST00000523950 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 SERPINB2P05120 415 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 TGFB2P61812 414 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 HYPKQ9NX55 129 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
VEGFA-225ENST00000523950 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
VEGFA-225ENST00000523950 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
VEGFA-225ENST00000523950 TWISTNBQ3B726 338 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-225ENST00000523950 TTLL7Q6ZT98 887 aa16.2■□□□□ 0.18
VEGFA-225ENST00000523950 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
VEGFA-225ENST00000523950 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
VEGFA-225ENST00000523950 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-225ENST00000523950 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
VEGFA-225ENST00000523950 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 IBTKQ9P2D0 1353 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-225ENST00000523950 E9PSI1 815 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 HLFQ16534 295 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
VEGFA-225ENST00000523950 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
VEGFA-225ENST00000523950 BRCA1P38398 1863 aaKnown RBP16.17■□□□□ 0.18
VEGFA-225ENST00000523950 ANXA1P04083 346 aa16.17■□□□□ 0.18
VEGFA-225ENST00000523950 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
VEGFA-225ENST00000523950 ZBTB3Q9H5J0 574 aa16.17■□□□□ 0.18
VEGFA-225ENST00000523950 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-225ENST00000523950 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
VEGFA-225ENST00000523950 NIP7Q9Y221 180 aaKnown RBP eCLIP16.17■□□□□ 0.18
VEGFA-225ENST00000523950 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-225ENST00000523950 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
VEGFA-225ENST00000523950 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
VEGFA-225ENST00000523950 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
VEGFA-225ENST00000523950 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 ST5P78524 1137 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 EXOSC9Q06265 439 aaKnown RBP16.15■□□□□ 0.18
VEGFA-225ENST00000523950 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
VEGFA-225ENST00000523950 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 PRR5LQ6MZQ0 368 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
VEGFA-225ENST00000523950 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
VEGFA-225ENST00000523950 NPHP1O15259 732 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 VAMP4O75379 141 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 SLFN5Q08AF3 891 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 ANKRD13DQ6ZTN6 518 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 RNF123Q5XPI4 1314 aa16.14■□□□□ 0.17
VEGFA-225ENST00000523950 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
VEGFA-225ENST00000523950 PDE6BP35913 854 aa16.13■□□□□ 0.17
VEGFA-225ENST00000523950 RIC1Q4ADV7 1423 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 DPEP1P16444 411 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 GPR162Q16538 588 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
VEGFA-225ENST00000523950 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
VEGFA-225ENST00000523950 A0A0G2JLW4 131 aa16.1■□□□□ 0.17
VEGFA-225ENST00000523950 H0YIN7 160 aa16.1■□□□□ 0.17
VEGFA-225ENST00000523950 GPTP24298 496 aa16.1■□□□□ 0.17
VEGFA-225ENST00000523950 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-225ENST00000523950 RIC3Q7Z5B4 369 aa16.1■□□□□ 0.17
VEGFA-225ENST00000523950 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
VEGFA-225ENST00000523950 PHAXQ9H814 394 aaKnown RBP16.1■□□□□ 0.17
VEGFA-225ENST00000523950 PIM2Q9P1W9 311 aa16.1■□□□□ 0.17
VEGFA-225ENST00000523950 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-225ENST00000523950 CHD4Q14839 1912 aa16.09■□□□□ 0.17
VEGFA-225ENST00000523950 NTSR2O95665 410 aa16.09■□□□□ 0.17
VEGFA-225ENST00000523950 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
VEGFA-225ENST00000523950 KCNA3P22001 575 aa16.09■□□□□ 0.17
VEGFA-225ENST00000523950 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.178e-7■□□□□ 10.9
VEGFA-225ENST00000523950 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
VEGFA-225ENST00000523950 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
VEGFA-225ENST00000523950 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-225ENST00000523950 CHRNA5P30532 468 aa16.08■□□□□ 0.16
VEGFA-225ENST00000523950 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
VEGFA-225ENST00000523950 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
VEGFA-225ENST00000523950 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
VEGFA-225ENST00000523950 C2CD5Q86YS7 1000 aa16.08■□□□□ 0.16
VEGFA-225ENST00000523950 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
VEGFA-225ENST00000523950 KLRG2A4D1S0 409 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-225ENST00000523950 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
VEGFA-225ENST00000523950 FLIIQ13045 1269 aa16.07■□□□□ 0.16
VEGFA-225ENST00000523950 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
VEGFA-225ENST00000523950 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
VEGFA-225ENST00000523950 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
VEGFA-225ENST00000523950 TNRC6CQ9HCJ0 1690 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms