RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 GPC6Q9Y625 555 aaPredicted RBP8.87□□□□□ -0.99
PCM1-219ENST00000523540 FAM69CQ0P6D2 419 aa8.86□□□□□ -0.99
PCM1-219ENST00000523540 TMEM164Q5U3C3 297 aa8.86□□□□□ -0.99
PCM1-219ENST00000523540 TMEM214Q6NUQ4 689 aaKnown RBP8.86□□□□□ -0.99
PCM1-219ENST00000523540 GOLGA6L1Q8N7Z2 621 aa8.86□□□□□ -0.99
PCM1-219ENST00000523540 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
PCM1-219ENST00000523540 NIFKQ9BYG3 293 aaKnown RBP8.86□□□□□ -0.99
PCM1-219ENST00000523540 SUV39H2Q9H5I1 410 aa8.86□□□□□ -0.99
PCM1-219ENST00000523540 TMEM88BA6NKF7 163 aa8.85□□□□□ -0.99
PCM1-219ENST00000523540 SWI5Q1ZZU3 235 aa8.85□□□□□ -0.99
PCM1-219ENST00000523540 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
PCM1-219ENST00000523540 SERTAD1Q9UHV2 236 aa8.85□□□□□ -0.99
PCM1-219ENST00000523540 C2CD2LO14523 706 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 TEAD4Q15561 434 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 SLCO4C1Q6ZQN7 724 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
PCM1-219ENST00000523540 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 NDFIP2Q9NV92 336 aa8.84□□□□□ -0.99
PCM1-219ENST00000523540 ATXN7L1Q9ULK2 861 aaPredicted RBP8.84□□□□□ -0.99
PCM1-219ENST00000523540 RRAGCQ9HB90 399 aa8.83□□□□□ -1
PCM1-219ENST00000523540 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.82□□□□□ -1
PCM1-219ENST00000523540 PSMA6P60900 246 aaKnown RBP8.82□□□□□ -1
PCM1-219ENST00000523540 GRIN2CQ14957 1233 aa8.82□□□□□ -1
PCM1-219ENST00000523540 TNS4Q8IZW8 715 aa8.82□□□□□ -1
PCM1-219ENST00000523540 KRTAP9-2Q9BYQ4 174 aa8.82□□□□□ -1
PCM1-219ENST00000523540 CRISPLD1Q9H336 500 aa8.82□□□□□ -1
PCM1-219ENST00000523540 USTQ9Y2C2 406 aa8.82□□□□□ -1
PCM1-219ENST00000523540 CARNS1A5YM72 827 aa8.81□□□□□ -1
PCM1-219ENST00000523540 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
PCM1-219ENST00000523540 ITGB7P26010 798 aa8.81□□□□□ -1
PCM1-219ENST00000523540 PHKA2P46019 1235 aa8.81□□□□□ -1
PCM1-219ENST00000523540 PSMG3-AS1Q96PY0 264 aa8.81□□□□□ -1
PCM1-219ENST00000523540 SLAIN2Q9P270 581 aa8.81□□□□□ -1
PCM1-219ENST00000523540 IGFBP4P22692 258 aa8.8□□□□□ -1
PCM1-219ENST00000523540 NBPF1Q3BBV0 1214 aa8.8□□□□□ -1
PCM1-219ENST00000523540 CD163Q86VB7 1156 aa8.8□□□□□ -1
PCM1-219ENST00000523540 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
PCM1-219ENST00000523540 HINFPQ9BQA5 517 aa8.8□□□□□ -1
PCM1-219ENST00000523540 RUBCNLQ9H714 662 aa8.8□□□□□ -1
PCM1-219ENST00000523540 GGA1Q9UJY5 639 aa8.8□□□□□ -1
PCM1-219ENST00000523540 GNB5O14775 395 aa8.79□□□□□ -1
PCM1-219ENST00000523540 LGR5O75473 907 aa8.79□□□□□ -1
PCM1-219ENST00000523540 EPXP11678 715 aa8.79□□□□□ -1
PCM1-219ENST00000523540 FGFR3P22607 806 aa8.79□□□□□ -1
PCM1-219ENST00000523540 MSX1P28360 303 aa8.79□□□□□ -1
PCM1-219ENST00000523540 DGKGP49619 791 aa8.79□□□□□ -1
PCM1-219ENST00000523540 CLP1Q92989 425 aaKnown RBP8.79□□□□□ -1
PCM1-219ENST00000523540 BTBD6Q96KE9 485 aa8.79□□□□□ -1
PCM1-219ENST00000523540 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
PCM1-219ENST00000523540 USP3Q9Y6I4 520 aa8.79□□□□□ -1
PCM1-219ENST00000523540 PIK3R2O00459 728 aa8.78□□□□□ -1
PCM1-219ENST00000523540 FOXO3O43524 673 aa8.78□□□□□ -1
PCM1-219ENST00000523540 BNIP3LO60238 219 aa8.78□□□□□ -1
PCM1-219ENST00000523540 BMP4P12644 408 aa8.78□□□□□ -1
PCM1-219ENST00000523540 CHRNA4P43681 627 aa8.78□□□□□ -1
PCM1-219ENST00000523540 CTBSQ01459 385 aa8.78□□□□□ -1
PCM1-219ENST00000523540 C1orf53Q5VUE5 145 aa8.78□□□□□ -1
PCM1-219ENST00000523540 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
PCM1-219ENST00000523540 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
PCM1-219ENST00000523540 C21orf2O43822 256 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 WEE1P30291 646 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 PDE4CQ08493 712 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 PGBD3Q8N328 593 aa8.77□□□□□ -1.01
PCM1-219ENST00000523540 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 SERTM1A2A2V5 107 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 EML1O00423 815 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 ARAFP10398 606 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
PCM1-219ENST00000523540 ATP4AP20648 1035 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 NOS2P35228 1153 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 OCLNQ16625 522 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 ZDHHC1Q8WTX9 485 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 C2orf49Q9BVC5 232 aaPredicted RBP8.76□□□□□ -1.01
PCM1-219ENST00000523540 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
PCM1-219ENST00000523540 AMPD1P23109 780 aa8.75□□□□□ -1.01
PCM1-219ENST00000523540 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
PCM1-219ENST00000523540 COL26A1Q96A83 441 aa8.75□□□□□ -1.01
PCM1-219ENST00000523540 PRIMPOLQ96LW4 560 aa8.75□□□□□ -1.01
PCM1-219ENST00000523540 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 PRMT3O60678 531 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 HIF1AQ16665 826 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
PCM1-219ENST00000523540 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
PCM1-219ENST00000523540 NOP53Q9NZM5 478 aaKnown RBP8.74□□□□□ -1.01
PCM1-219ENST00000523540 SSFA2P28290 1259 aa8.73□□□□□ -1.01
PCM1-219ENST00000523540 FIGNL1Q6PIW4 674 aa8.73□□□□□ -1.01
PCM1-219ENST00000523540 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
PCM1-219ENST00000523540 HCN2Q9UL51 889 aa8.73□□□□□ -1.01
PCM1-219ENST00000523540 PPP1R12BO60237 982 aaPredicted RBP8.72□□□□□ -1.01
PCM1-219ENST00000523540 ATP2B4P23634 1241 aa8.72□□□□□ -1.01
PCM1-219ENST00000523540 PHLDB3Q6NSJ2 640 aa8.72□□□□□ -1.01
PCM1-219ENST00000523540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms