RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 GAS8O95995 478 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 UTP14AQ9BVJ6 771 aaKnown RBP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 LRRC27Q9C0I9 530 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 PPP1R1BQ9UD71 204 aaPredicted RBP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 ZNF354CQ86Y25 554 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 PUF60Q9UHX1 559 aaKnown RBP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 STX1AQ16623 288 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 SYCP3Q8IZU3 236 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 PRIMPOLQ96LW4 560 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 MPHOSPH6Q99547 160 aaKnown RBP14.21□□□□□ -0.13
EXTL3-214ENST00000523271 VCXQ9H320 206 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 WHAMMQ8TF30 809 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 ATRIPQ8WXE1 791 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 MVPQ14764 893 aaKnown RBP14.21□□□□□ -0.13
EXTL3-214ENST00000523271 MICALL1Q8N3F8 863 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 CNTLNQ9NXG0 1405 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 CNNM3Q8NE01 707 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 RSPH14Q9UHP6 348 aa14.21□□□□□ -0.13
EXTL3-214ENST00000523271 RSPH3Q86UC2 560 aa14.21□□□□□ -0.14
EXTL3-214ENST00000523271 AKAP2Q9Y2D5 859 aa14.21□□□□□ -0.14
EXTL3-214ENST00000523271 AIDAQ96BJ3 306 aa14.21□□□□□ -0.14
EXTL3-214ENST00000523271 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
EXTL3-214ENST00000523271 GBP1P32455 592 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
EXTL3-214ENST00000523271 FAM177BA6PVY3 158 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 LMNTD2Q8IXW0 634 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 SAMD15Q9P1V8 674 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 NAA25Q14CX7 972 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 SEPT14Q6ZU15 432 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 ZHX1Q9UKY1 873 aaPredicted RBP14.2□□□□□ -0.14
EXTL3-214ENST00000523271 STRN4Q9NRL3 753 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 MCM4P33991 863 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC40Q4G0X9 1142 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
EXTL3-214ENST00000523271 CCT6BQ92526 530 aa14.2□□□□□ -0.14
EXTL3-214ENST00000523271 SH3BGRP55822 239 aaPredicted RBP14.19□□□□□ -0.14
EXTL3-214ENST00000523271 STX6O43752 255 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 ZBTB17Q13105 803 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 GSTA5Q7RTV2 222 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 MAP7Q14244 749 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 TCP11L1Q9NUJ3 509 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 CHMP4BP1P59074 171 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 TCERG1LQ5VWI1 586 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 CEP128Q6ZU80 1094 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
EXTL3-214ENST00000523271 TACC3Q9Y6A5 838 aa14.19□□□□□ -0.14
EXTL3-214ENST00000523271 AACSQ86V21 672 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 TTC16Q8NEE8 873 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC114Q96M63 670 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 PFDN4Q9NQP4 134 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CPLX4Q7Z7G2 160 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 VPS52Q8N1B4 723 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 ATP5DP30049 168 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 WDR70Q9NW82 654 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 TRMT1Q9NXH9 659 aaKnown RBP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC50Q8IVM0 306 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 SEPT8Q92599 483 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CTAGE1Q96RT6 745 aa14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CACYBPQ9HB71 228 aaKnown RBP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CWC27Q6UX04 472 aaKnown RBP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.18□□□□□ -0.14
EXTL3-214ENST00000523271 CRCPO75575 148 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 MKNK2Q9HBH9 465 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 SPAG5Q96R06 1193 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 CTAGE9A4FU28 777 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
EXTL3-214ENST00000523271 SIL1Q9H173 461 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 TMC6Q7Z403 805 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 CRACR2BQ8N4Y2 399 aaPredicted RBP14.17□□□□□ -0.14
EXTL3-214ENST00000523271 LMBR1Q8WVP7 490 aa14.17□□□□□ -0.14
EXTL3-214ENST00000523271 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 GPRASP1Q5JY77 1395 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 ERCC3P19447 782 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 AFAP1L2Q8N4X5 818 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 PHLDB2Q86SQ0 1253 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 SEC62Q99442 399 aaKnown RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 MYO1BO43795 1136 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 CYLC1P35663 651 aaPredicted RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 IQCA1Q86XH1 822 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 C10orf67Q8IYJ2 551 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 CCDC170Q8IYT3 715 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 USP25Q9UHP3 1055 aa14.16□□□□□ -0.14
EXTL3-214ENST00000523271 VIMP08670 466 aaKnown RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 IGHMBP2P38935 993 aaKnown RBP14.16□□□□□ -0.14
EXTL3-214ENST00000523271 PDE1CQ14123 709 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms