RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PDIA6Q15084 440 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 PROSER3Q2NL68 480 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 CHMP4AQ9BY43 222 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 CHPF2Q9P2E5 772 aa15.29■□□□□ 0.04
PVT1-215ENST00000522963 BCAR3O75815 825 aa15.28■□□□□ 0.04
PVT1-215ENST00000522963 ANXA1P04083 346 aa15.28■□□□□ 0.04
PVT1-215ENST00000522963 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
PVT1-215ENST00000522963 BCL2L12Q9HB09 334 aa15.28■□□□□ 0.04
PVT1-215ENST00000522963 SRCAPQ6ZRS2 3230 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 ERBB4Q15303 1308 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 DDR1Q08345 913 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 NFIXQ14938 502 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
PVT1-215ENST00000522963 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 DBF4Q9UBU7 674 aaPredicted RBP15.27■□□□□ 0.04
PVT1-215ENST00000522963 WWC3Q9ULE0 1092 aa15.27■□□□□ 0.04
PVT1-215ENST00000522963 CAMTA2O94983 1202 aa15.26■□□□□ 0.03
PVT1-215ENST00000522963 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
PVT1-215ENST00000522963 TBC1D9BQ66K14 1250 aa15.26■□□□□ 0.03
PVT1-215ENST00000522963 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
PVT1-215ENST00000522963 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
PVT1-215ENST00000522963 TM4SF1P30408 202 aa15.25■□□□□ 0.03
PVT1-215ENST00000522963 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
PVT1-215ENST00000522963 KIF6Q6ZMV9 814 aa15.25■□□□□ 0.03
PVT1-215ENST00000522963 G2E3Q7L622 706 aa15.25■□□□□ 0.03
PVT1-215ENST00000522963 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
PVT1-215ENST00000522963 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
PVT1-215ENST00000522963 NPHP1O15259 732 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 SERPINB2P05120 415 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
PVT1-215ENST00000522963 GPR162Q16538 588 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
PVT1-215ENST00000522963 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
PVT1-215ENST00000522963 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
PVT1-215ENST00000522963 FAM177BA6PVY3 158 aa15.23■□□□□ 0.03
PVT1-215ENST00000522963 XAGE3Q8WTP9 111 aa15.23■□□□□ 0.03
PVT1-215ENST00000522963 SETDB2Q96T68 719 aa15.23■□□□□ 0.03
PVT1-215ENST00000522963 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
PVT1-215ENST00000522963 FLIIQ13045 1269 aa15.22■□□□□ 0.03
PVT1-215ENST00000522963 HLFQ16534 295 aa15.22■□□□□ 0.03
PVT1-215ENST00000522963 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
PVT1-215ENST00000522963 NOB1Q9ULX3 412 aaKnown RBP15.22■□□□□ 0.03
PVT1-215ENST00000522963 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
PVT1-215ENST00000522963 A0A0G2JLW4 131 aa15.21■□□□□ 0.03
PVT1-215ENST00000522963 COPS6Q7L5N1 327 aa15.21■□□□□ 0.03
PVT1-215ENST00000522963 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.03
PVT1-215ENST00000522963 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
PVT1-215ENST00000522963 KIF16BQ96L93 1317 aa15.2■□□□□ 0.02
PVT1-215ENST00000522963 NUP98P52948 1817 aa15.2■□□□□ 0.02
PVT1-215ENST00000522963 C10orf71Q711Q0 1435 aa15.2■□□□□ 0.02
PVT1-215ENST00000522963 CLEC4GQ6UXB4 293 aa15.2■□□□□ 0.02
PVT1-215ENST00000522963 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
PVT1-215ENST00000522963 PLIN1O60240 522 aa15.19■□□□□ 0.02
PVT1-215ENST00000522963 DPEP1P16444 411 aa15.19■□□□□ 0.02
PVT1-215ENST00000522963 GPTP24298 496 aa15.19■□□□□ 0.02
PVT1-215ENST00000522963 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
PVT1-215ENST00000522963 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
PVT1-215ENST00000522963 CARMIL3Q8ND23 1372 aa15.19■□□□□ 0.02
PVT1-215ENST00000522963 PTPRCP08575 1304 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 ERVV-1B6SEH8 477 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 RRP1P56182 461 aaKnown RBP15.18■□□□□ 0.02
PVT1-215ENST00000522963 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
PVT1-215ENST00000522963 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
PVT1-215ENST00000522963 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
PVT1-215ENST00000522963 TRIM27P14373 513 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 GTF2E1P29083 439 aaPredicted RBP15.17■□□□□ 0.02
PVT1-215ENST00000522963 CHRNA5P30532 468 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 TGFB2P61812 414 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 PRR5LQ6MZQ0 368 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
PVT1-215ENST00000522963 PXDNLA1KZ92 1463 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 ADCY9O60503 1353 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 PI4KAP2A4QPH2 592 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 F6X3S4 739 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
PVT1-215ENST00000522963 YBX3P16989 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
PVT1-215ENST00000522963 ST5P78524 1137 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 GIGYF2Q6Y7W6 1299 aaKnown RBP15.16■□□□□ 0.02
PVT1-215ENST00000522963 ANKRD13DQ6ZTN6 518 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
PVT1-215ENST00000522963 BCS1LQ9Y276 419 aa15.16■□□□□ 0.02
PVT1-215ENST00000522963 NRXN2Q9P2S2 1712 aa15.15■□□□□ 0.02
PVT1-215ENST00000522963 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
PVT1-215ENST00000522963 C2CD5Q86YS7 1000 aa15.15■□□□□ 0.02
PVT1-215ENST00000522963 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms