RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FSHRP23945 695 aa10.49□□□□□ -0.73
SDCBP-210ENST00000522843 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
SDCBP-210ENST00000522843 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
SDCBP-210ENST00000522843 EMILIN1Q9Y6C2 1016 aa10.49□□□□□ -0.73
SDCBP-210ENST00000522843 LAMC1P11047 1609 aa10.48□□□□□ -0.73
SDCBP-210ENST00000522843 GSK3AP49840 483 aa10.48□□□□□ -0.73
SDCBP-210ENST00000522843 SUZ12Q15022 739 aaKnown RBP10.48□□□□□ -0.73
SDCBP-210ENST00000522843 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.48□□□□□ -0.73
SDCBP-210ENST00000522843 NBPF14Q5TI25 921 aa10.48□□□□□ -0.73
SDCBP-210ENST00000522843 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
SDCBP-210ENST00000522843 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
SDCBP-210ENST00000522843 PTPN23Q9H3S7 1636 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 TUSC1Q2TAM9 212 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 SH3BP5LQ7L8J4 393 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 DEFB132Q7Z7B7 95 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 GPR161Q8N6U8 529 aaKnown RBP10.47□□□□□ -0.73
SDCBP-210ENST00000522843 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.47□□□□□ -0.73
SDCBP-210ENST00000522843 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
SDCBP-210ENST00000522843 LILRB3O75022 631 aa10.46□□□□□ -0.73
SDCBP-210ENST00000522843 QPCTQ16769 361 aa10.46□□□□□ -0.73
SDCBP-210ENST00000522843 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
SDCBP-210ENST00000522843 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
SDCBP-210ENST00000522843 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
SDCBP-210ENST00000522843 NALCNQ8IZF0 1738 aa10.46□□□□□ -0.74
SDCBP-210ENST00000522843 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 ADGRL3Q9HAR2 1447 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 METP08581 1390 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 ANKRD30AQ9BXX3 1397 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 TTLL8A6PVC2 850 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 KRT76Q01546 638 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 MYSM1Q5VVJ2 828 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 AK7Q96M32 723 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 CNTNAP3BQ96NU0 1288 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
SDCBP-210ENST00000522843 COL22A1Q8NFW1 1626 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-210ENST00000522843 MYOM2P54296 1465 aa10.44□□□□□ -0.74
SDCBP-210ENST00000522843 BLMP54132 1417 aaPredicted RBP10.44□□□□□ -0.74
SDCBP-210ENST00000522843 MAGEB6P1A0A0J9YX57 407 aa10.44□□□□□ -0.74
SDCBP-210ENST00000522843 PTSQ03393 145 aa10.44□□□□□ -0.74
SDCBP-210ENST00000522843 TMEM151AQ8N4L1 468 aa10.44□□□□□ -0.74
SDCBP-210ENST00000522843 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
SDCBP-210ENST00000522843 VPS8Q8N3P4 1428 aa10.43□□□□□ -0.74
SDCBP-210ENST00000522843 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
SDCBP-210ENST00000522843 ORAI2Q96SN7 254 aa10.43□□□□□ -0.74
SDCBP-210ENST00000522843 ADAMTS8Q9UP79 889 aa10.43□□□□□ -0.74
SDCBP-210ENST00000522843 GLI3P10071 1580 aa10.43□□□□□ -0.74
SDCBP-210ENST00000522843 E9PCH4 1651 aa10.42□□□□□ -0.74
SDCBP-210ENST00000522843 NANOS1Q8WY41 292 aaKnown RBP10.42□□□□□ -0.74
SDCBP-210ENST00000522843 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.741e-6■□□□□ 11.3
SDCBP-210ENST00000522843 GJD4Q96KN9 370 aaPredicted RBP10.42□□□□□ -0.74
SDCBP-210ENST00000522843 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
SDCBP-210ENST00000522843 ADGRL2O95490 1459 aa10.42□□□□□ -0.74
SDCBP-210ENST00000522843 FIGNL2A6NMB9 653 aa10.41□□□□□ -0.74
SDCBP-210ENST00000522843 GDF11O95390 407 aa10.41□□□□□ -0.74
SDCBP-210ENST00000522843 RASSF7Q02833 373 aa10.41□□□□□ -0.74
SDCBP-210ENST00000522843 COL25A1Q9BXS0 654 aaPredicted RBP10.41□□□□□ -0.74
SDCBP-210ENST00000522843 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
SDCBP-210ENST00000522843 RNF225M0QZC1 329 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-210ENST00000522843 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-210ENST00000522843 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-210ENST00000522843 Q6ZVU0 165 aa10.4□□□□□ -0.74
SDCBP-210ENST00000522843 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
SDCBP-210ENST00000522843 CARD14Q9BXL6 1004 aa10.4□□□□□ -0.74
SDCBP-210ENST00000522843 RALGAPBQ86X10 1494 aa10.4□□□□□ -0.74
SDCBP-210ENST00000522843 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.75
SDCBP-210ENST00000522843 MARF1Q9Y4F3 1742 aaKnown RBP10.39□□□□□ -0.75
SDCBP-210ENST00000522843 SPINT1O43278 529 aa10.39□□□□□ -0.75
SDCBP-210ENST00000522843 CBLBQ13191 982 aa10.39□□□□□ -0.75
SDCBP-210ENST00000522843 ERFEQ4G0M1 354 aa10.39□□□□□ -0.75
SDCBP-210ENST00000522843 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.38□□□□□ -0.75
SDCBP-210ENST00000522843 PXDNQ92626 1479 aa10.37□□□□□ -0.75
SDCBP-210ENST00000522843 PDE4DQ08499 809 aa10.37□□□□□ -0.75
SDCBP-210ENST00000522843 SLIT2O94813 1529 aa10.37□□□□□ -0.75
SDCBP-210ENST00000522843 SPHKAPQ2M3C7 1700 aa10.36□□□□□ -0.75
SDCBP-210ENST00000522843 SLC35F4A4IF30 521 aa10.36□□□□□ -0.75
SDCBP-210ENST00000522843 ROBO2Q9HCK4 1378 aa10.36□□□□□ -0.75
SDCBP-210ENST00000522843 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
SDCBP-210ENST00000522843 RNFT1Q5M7Z0 435 aa10.35□□□□□ -0.75
SDCBP-210ENST00000522843 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-210ENST00000522843 PDXDC2PQ6P474 469 aa10.35□□□□□ -0.75
SDCBP-210ENST00000522843 UNC5CLQ8IV45 518 aa10.35□□□□□ -0.75
SDCBP-210ENST00000522843 SEPT12Q8IYM1 358 aa10.34□□□□□ -0.75
SDCBP-210ENST00000522843 SVOPQ8N4V2 548 aa10.34□□□□□ -0.75
SDCBP-210ENST00000522843 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-210ENST00000522843 ARHGAP9Q9BRR9 750 aa10.34□□□□□ -0.75
SDCBP-210ENST00000522843 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
SDCBP-210ENST00000522843 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
SDCBP-210ENST00000522843 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-210ENST00000522843 DHX9Q08211 1270 aaKnown RBP10.33□□□□□ -0.76
SDCBP-210ENST00000522843 VWA5B2Q8N398 1253 aa10.33□□□□□ -0.76
SDCBP-210ENST00000522843 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
SDCBP-210ENST00000522843 SLURP2P0DP57 97 aa10.32□□□□□ -0.76
SDCBP-210ENST00000522843 ITGA6P23229 1130 aa10.32□□□□□ -0.76
SDCBP-210ENST00000522843 CTDSPL2Q05D32 466 aa10.32□□□□□ -0.76
SDCBP-210ENST00000522843 SV2AQ7L0J3 742 aa10.32□□□□□ -0.76
SDCBP-210ENST00000522843 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
SDCBP-210ENST00000522843 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
SDCBP-210ENST00000522843 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
SDCBP-210ENST00000522843 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms