RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	STX6	O43752	255 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	SYT1	P21579	422 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	TAF7	Q15545	349 aa	Predicted RBP	10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	UTP14C	Q5TAP6	766 aa	Known RBP	10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	GIMAP6	Q6P9H5	292 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	PPP1R42	Q7Z4L9	355 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	SSH3	Q8TE77	659 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	PXDNL	A1KZ92	1463 aa		10.2	□□□□□ -0.78
PTK2-238	ENST00000521986	FIBP	O43427	364 aa		10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	BCL2L12	Q9HB09	334 aa		10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	TMEM94	Q12767	1356 aa		10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	SURF6	O75683	361 aa	Known RBP	10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	EIF2S2	P20042	333 aa	Known RBP	10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	ATP2B3	Q16720	1220 aa		10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	PI4K2B	Q8TCG2	481 aa		10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	DDX17	Q92841	729 aa	Known RBP	10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	CHD2	O14647	1828 aa	Known RBP	10.19	□□□□□ -0.78
PTK2-238	ENST00000521986	AP5Z1	O43299	807 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	ANXA1	P04083	346 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	KIAA1524	Q8TCG1	905 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	FUCA2	Q9BTY2	467 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	C19orf44	Q9H6X5	657 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	AOX1	Q06278	1338 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	CACNA1F	O60840	1977 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	EPB41L2	O43491	1005 aa	Known RBP	10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	KCNQ3	O43525	872 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	DTNB	O60941	627 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	F13A1	P00488	732 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	AK2	P54819	239 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	POLA2	Q14181	598 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	ABTB2	Q8N961	1025 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	RHPN1	Q8TCX5	695 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	TTC14	Q96N46	770 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	KCNF1	Q9H3M0	494 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	CHPF2	Q9P2E5	772 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	PYCARD	Q9ULZ3	195 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	SNX14	Q9Y5W7	946 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	ADGRL3	Q9HAR2	1447 aa		10.18	□□□□□ -0.78
PTK2-238	ENST00000521986	SRGAP3	O43295	1099 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	PSME1	Q06323	249 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	RUFY3	Q7L099	469 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	RASEF	Q8IZ41	740 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	SPC24	Q8NBT2	197 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	LGR6	Q9HBX8	967 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	LIMCH1	Q9UPQ0	1083 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	SMC3	Q9UQE7	1217 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	ATP6V1D	Q9Y5K8	247 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	RIOK3	O14730	519 aa	Known RBP	10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	PDCL2	Q8N4E4	241 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	DIAPH3	Q9NSV4	1193 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	RAD50	Q92878	1312 aa		10.17	□□□□□ -0.78
PTK2-238	ENST00000521986	SPDYE4	A6NLX3	237 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	SGSM2	O43147	1006 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	CPA1	P15085	419 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	DNM1	Q05193	864 aa	Known RBP	10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	CHAF1A	Q13111	956 aa	Predicted RBP	10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	LTN1	O94822	1766 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	EIF4A1	P60842	406 aa	Known RBP	10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	LSG1	Q9H089	658 aa	Known RBP	10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	SPG7	Q9UQ90	795 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	CEMIP	Q8WUJ3	1361 aa		10.16	□□□□□ -0.78
PTK2-238	ENST00000521986	ANKAR	Q7Z5J8	1434 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	MED1	Q15648	1581 aa	Predicted RBP	10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	PI4KAP2	A4QPH2	592 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	RAB11FIP3	O75154	756 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	ATF3	P18847	181 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	BEND3	Q5T5X7	828 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	NBPF6	Q5VWK0	638 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	LMOD2	Q6P5Q4	547 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	PI4KAP1	Q8N8J0	262 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	NBPF4	Q96M43	638 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	GTPBP4	Q9BZE4	634 aa	Known RBP	10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	USP54	Q70EL1	1684 aa		10.15	□□□□□ -0.78
PTK2-238	ENST00000521986	LARGE1	O95461	756 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	TPM3	P06753	285 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	GJB2	P29033	226 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	CWC27	Q6UX04	472 aa	Known RBP	10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	CCDC83	Q8IWF9	413 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	BABAM1	Q9NWV8	329 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	ADCY9	O60503	1353 aa		10.15	□□□□□ -0.79
PTK2-238	ENST00000521986	KDM3B	Q7LBC6	1761 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	GOLGA6L6	A8MZA4	724 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	CCDC192	P0DO97	292 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	CAST	P20810	708 aa	Known RBP	10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	DNAAF4	Q8WXU2	420 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	KIF1BP	Q96EK5	621 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	MTMR6	Q9Y217	621 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	CRYBG1	Q9Y4K1	1723 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	RGPD2	P0DJD1	1756 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	TCHH	Q07283	1943 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	U2AF2	P26368	475 aa	Known RBP eCLIP	10.14	□□□□□ -0.79	4e-7	■■■□□ 16.6
PTK2-238	ENST00000521986	KLHL34	Q8N239	644 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	ANKRD7	Q92527	254 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	HYPK	Q9NX55	129 aa		10.14	□□□□□ -0.79
PTK2-238	ENST00000521986	CTIF	O43310	598 aa	Known RBP	10.13	□□□□□ -0.79
PTK2-238	ENST00000521986	CNTROB	Q8N137	903 aa		10.13	□□□□□ -0.79
PTK2-238	ENST00000521986	LRRC59	Q96AG4	307 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms