RNA–Protein interactions for RNA: ENST00000521940.1

EFR3A-205, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 804 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-205ENST00000521940 SIX5Q8N196 739 aa9.64□□□□□ -0.87
EFR3A-205ENST00000521940 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
EFR3A-205ENST00000521940 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
EFR3A-205ENST00000521940 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
EFR3A-205ENST00000521940 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
EFR3A-205ENST00000521940 GNB5O14775 395 aa9.63□□□□□ -0.87
EFR3A-205ENST00000521940 EFSO43281 561 aa9.63□□□□□ -0.87
EFR3A-205ENST00000521940 LARP1Q6PKG0 1096 aaKnown RBP9.63□□□□□ -0.87
EFR3A-205ENST00000521940 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
EFR3A-205ENST00000521940 TSPAN10Q9H1Z9 355 aaPredicted RBP9.63□□□□□ -0.87
EFR3A-205ENST00000521940 NOP53Q9NZM5 478 aaKnown RBP9.63□□□□□ -0.87
EFR3A-205ENST00000521940 A6NJR5 290 aa9.62□□□□□ -0.87
EFR3A-205ENST00000521940 HIRAP54198 1017 aaPredicted RBP9.62□□□□□ -0.87
EFR3A-205ENST00000521940 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
EFR3A-205ENST00000521940 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
EFR3A-205ENST00000521940 PPP1R12BO60237 982 aaPredicted RBP9.61□□□□□ -0.87
EFR3A-205ENST00000521940 ALAS2P22557 587 aa9.61□□□□□ -0.87
EFR3A-205ENST00000521940 SEC13P55735 322 aa9.61□□□□□ -0.87
EFR3A-205ENST00000521940 PCBP4P57723 403 aaKnown RBP9.61□□□□□ -0.87
EFR3A-205ENST00000521940 CHSY3Q70JA7 882 aa9.61□□□□□ -0.87
EFR3A-205ENST00000521940 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
EFR3A-205ENST00000521940 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
EFR3A-205ENST00000521940 GRIN2CQ14957 1233 aa9.6□□□□□ -0.87
EFR3A-205ENST00000521940 HIF1AQ16665 826 aa9.6□□□□□ -0.87
EFR3A-205ENST00000521940 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
EFR3A-205ENST00000521940 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
EFR3A-205ENST00000521940 HCN4Q9Y3Q4 1203 aa9.6□□□□□ -0.87
EFR3A-205ENST00000521940 SFI1A8K8P3 1242 aa9.59□□□□□ -0.87
EFR3A-205ENST00000521940 FCHSD1Q86WN1 690 aa9.59□□□□□ -0.87
EFR3A-205ENST00000521940 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
EFR3A-205ENST00000521940 PHACTR1Q9C0D0 580 aa9.59□□□□□ -0.87
EFR3A-205ENST00000521940 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
EFR3A-205ENST00000521940 DGKGP49619 791 aa9.58□□□□□ -0.88
EFR3A-205ENST00000521940 STAG2Q8N3U4 1231 aa9.58□□□□□ -0.88
EFR3A-205ENST00000521940 C7orf43Q8WVR3 580 aa9.58□□□□□ -0.88
EFR3A-205ENST00000521940 KLF15Q9UIH9 416 aa9.58□□□□□ -0.88
EFR3A-205ENST00000521940 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 SYT9Q86SS6 491 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 CEP63Q96MT8 703 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 HINFPQ9BQA5 517 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 PPP1R12CQ9BZL4 782 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 HCN2Q9UL51 889 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
EFR3A-205ENST00000521940 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
EFR3A-205ENST00000521940 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
EFR3A-205ENST00000521940 SIN3BO75182 1162 aa9.56□□□□□ -0.88
EFR3A-205ENST00000521940 HOXB4P17483 251 aaPredicted RBP9.56□□□□□ -0.88
EFR3A-205ENST00000521940 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
EFR3A-205ENST00000521940 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
EFR3A-205ENST00000521940 KRBA1A5PL33 1030 aa9.55□□□□□ -0.88
EFR3A-205ENST00000521940 COL8A1P27658 744 aa9.55□□□□□ -0.88
EFR3A-205ENST00000521940 CHMP7Q8WUX9 453 aaPredicted RBP9.55□□□□□ -0.88
EFR3A-205ENST00000521940 SCG3Q8WXD2 468 aaKnown RBP9.55□□□□□ -0.88
EFR3A-205ENST00000521940 VRTNQ9H8Y1 702 aa9.55□□□□□ -0.88
EFR3A-205ENST00000521940 BRD7Q9NPI1 651 aa9.55□□□□□ -0.88
EFR3A-205ENST00000521940 SPDYE3A6NKU9 549 aa9.54□□□□□ -0.88
EFR3A-205ENST00000521940 DKK1O94907 266 aa9.54□□□□□ -0.88
EFR3A-205ENST00000521940 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
EFR3A-205ENST00000521940 ALDH16A1Q8IZ83 802 aa9.54□□□□□ -0.88
EFR3A-205ENST00000521940 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
EFR3A-205ENST00000521940 SUV39H2Q9H5I1 410 aa9.54□□□□□ -0.88
EFR3A-205ENST00000521940 KCNH4Q9UQ05 1017 aa9.54□□□□□ -0.88
EFR3A-205ENST00000521940 SPEM2Q0P670 501 aa9.53□□□□□ -0.88
EFR3A-205ENST00000521940 HSH2DQ96JZ2 352 aa9.53□□□□□ -0.88
EFR3A-205ENST00000521940 SUSD3Q96L08 255 aa9.53□□□□□ -0.88
EFR3A-205ENST00000521940 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
EFR3A-205ENST00000521940 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
EFR3A-205ENST00000521940 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
EFR3A-205ENST00000521940 KCNQ4P56696 695 aa9.52□□□□□ -0.89
EFR3A-205ENST00000521940 DPYDQ12882 1025 aa9.52□□□□□ -0.89
EFR3A-205ENST00000521940 C21orf2O43822 256 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 PROCP04070 461 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 ITGB2P05107 769 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 PTK7Q13308 1070 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
EFR3A-205ENST00000521940 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
EFR3A-205ENST00000521940 IGFBP4P22692 258 aa9.5□□□□□ -0.89
EFR3A-205ENST00000521940 TYRO3Q06418 890 aa9.5□□□□□ -0.89
EFR3A-205ENST00000521940 CRTC2Q53ET0 693 aaPredicted RBP9.5□□□□□ -0.89
EFR3A-205ENST00000521940 TNFRSF25Q93038 417 aa9.5□□□□□ -0.89
EFR3A-205ENST00000521940 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
EFR3A-205ENST00000521940 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L21D6R901 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 RTN1Q16799 776 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 PLVAPQ9BX97 442 aa9.49□□□□□ -0.89
EFR3A-205ENST00000521940 PRRT3Q5FWE3 981 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms