RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	DUSP9	Q99956	384 aa	Known RBP	10.46	□□□□□ -0.73
SPIDR-215	ENST00000521798	OSBPL3	Q9H4L5	887 aa		10.46	□□□□□ -0.73
SPIDR-215	ENST00000521798	CCDC87	Q9NVE4	849 aa		10.46	□□□□□ -0.73
SPIDR-215	ENST00000521798	KIF14	Q15058	1648 aa		10.46	□□□□□ -0.74
SPIDR-215	ENST00000521798	TNFRSF10B	O14763	440 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	INHA	P05111	366 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	DAB2	P98082	770 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	ANKRD13D	Q6ZTN6	518 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	NT5DC4	Q86YG4	428 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	STAG2	Q8N3U4	1231 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	FAM161B	Q96MY7	647 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	METTL5	Q9NRN9	209 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798	STIM2	Q9P246	746 aa		10.45	□□□□□ -0.74
SPIDR-215	ENST00000521798		A0A1W2PRU2	124 aa		10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	PPP1R12B	O60237	982 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	SORBS3	O60504	671 aa		10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	STAU1	O95793	577 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	PDE3B	Q13370	1112 aa		10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	SLC4A9	Q96Q91	983 aa		10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	IL21	Q9HBE4	155 aa		10.44	□□□□□ -0.74
SPIDR-215	ENST00000521798	NEO1	Q92859	1461 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	PLCH2	O75038	1416 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	GPR182	O15218	404 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	FOXK2	Q01167	660 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	ATP2B2	Q01814	1243 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	COX20	Q5RI15	118 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	VASH1	Q7L8A9	365 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	TRIM52	Q96A61	297 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	TINF2	Q9BSI4	451 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	ETNK1	Q9HBU6	452 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	SERTAD1	Q9UHV2	236 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	ARAP3	Q8WWN8	1544 aa		10.43	□□□□□ -0.74
SPIDR-215	ENST00000521798	PHLDB1	Q86UU1	1377 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	S1PR4	O95977	384 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	FANCC	Q00597	558 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	AAMP	Q13685	434 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	ZNF516	Q92618	1163 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	TGIF2	Q9GZN2	237 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	FANCA	O15360	1455 aa		10.42	□□□□□ -0.74
SPIDR-215	ENST00000521798	VARS	P26640	1264 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	PSMD2	Q13200	908 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	TJAP1	Q5JTD0	557 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	ABTB2	Q8N961	1025 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	RNF34	Q969K3	372 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	RNF19A	Q9NV58	838 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	VTI1B	Q9UEU0	232 aa		10.41	□□□□□ -0.74
SPIDR-215	ENST00000521798	SLC9A9	Q8IVB4	645 aa		10.4	□□□□□ -0.74
SPIDR-215	ENST00000521798	QTRT2	Q9H974	415 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-215	ENST00000521798	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.4	□□□□□ -0.74
SPIDR-215	ENST00000521798	WWC3	Q9ULE0	1092 aa		10.4	□□□□□ -0.74
SPIDR-215	ENST00000521798	AKNA	Q7Z591	1439 aa		10.4	□□□□□ -0.75
SPIDR-215	ENST00000521798	MTUS2	Q5JR59	1369 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	ENOX2	Q16206	610 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	SLC43A3	Q8NBI5	491 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	MYO19	Q96H55	970 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	TANGO6	Q9C0B7	1094 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	CYLD	Q9NQC7	956 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	TIAM1	Q13009	1591 aa		10.39	□□□□□ -0.75
SPIDR-215	ENST00000521798	MYO5C	Q9NQX4	1742 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	EHBP1L1	Q8N3D4	1523 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	RAPGEF3	O95398	923 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	PSMA6	P60900	246 aa	Known RBP	10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	MTFR1	Q15390	333 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	CCSER2	Q9H7U1	834 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798	CFAP74	Q9C0B2	1584 aa		10.38	□□□□□ -0.75
SPIDR-215	ENST00000521798		A6NJY4	79 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	GNRH1	P01148	92 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	ZNF76	P36508	570 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	DHX9	Q08211	1270 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	ESCO1	Q5FWF5	840 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	FRMPD1	Q5SYB0	1578 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	EFCAB2	Q5VUJ9	269 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	ALG1L	Q6GMV1	187 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	DPH6	Q7L8W6	267 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	CYP2U1	Q7Z449	544 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	GJD3	Q8N144	294 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	SETDB2	Q96T68	719 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	TMPRSS4	Q9NRS4	437 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	LRFN2	Q9ULH4	789 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	MAP3K1	Q13233	1512 aa		10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.37	□□□□□ -0.75
SPIDR-215	ENST00000521798	PREX2	Q70Z35	1606 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	DENND4B	O75064	1496 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	PNMA6F	A0A0J9YX94	578 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	WNT7B	P56706	349 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	TBCEL	Q5QJ74	424 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	POTEA	Q6S8J7	498 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	NIF3L1	Q9GZT8	377 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	ARHGAP5	Q13017	1502 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	ADGRL1	O94910	1474 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	LRRC9	Q6ZRR7	1453 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	CDC42BPB	Q9Y5S2	1711 aa		10.36	□□□□□ -0.75
SPIDR-215	ENST00000521798	SMTN	P53814	917 aa		10.35	□□□□□ -0.75
SPIDR-215	ENST00000521798	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-215	ENST00000521798	NLRP2	Q9NX02	1062 aa		10.35	□□□□□ -0.75
SPIDR-215	ENST00000521798	CDC42BPA	Q5VT25	1732 aa		10.35	□□□□□ -0.75
SPIDR-215	ENST00000521798	SCAPER	Q9BY12	1400 aa		10.34	□□□□□ -0.75
SPIDR-215	ENST00000521798	ZBTB39	O15060	712 aa		10.34	□□□□□ -0.75
SPIDR-215	ENST00000521798	ZBTB24	O43167	697 aa	Predicted RBP	10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms