RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PCNTO95613 3336 aa15.26■□□□□ 0.03
CSMD1-210ENST00000521646 HSPA6P17066 643 aa15.26■□□□□ 0.03
CSMD1-210ENST00000521646 ARSIQ5FYB1 569 aa15.26■□□□□ 0.03
CSMD1-210ENST00000521646 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
CSMD1-210ENST00000521646 GPHNQ9NQX3 736 aaPredicted RBP15.26■□□□□ 0.03
CSMD1-210ENST00000521646 RTCBQ9Y3I0 505 aaKnown RBP15.26■□□□□ 0.03
CSMD1-210ENST00000521646 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
CSMD1-210ENST00000521646 RPS6KA4O75676 772 aa15.25■□□□□ 0.03
CSMD1-210ENST00000521646 IL13P35225 146 aa15.25■□□□□ 0.03
CSMD1-210ENST00000521646 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
CSMD1-210ENST00000521646 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
CSMD1-210ENST00000521646 NFATC2IPQ8NCF5 419 aa15.25■□□□□ 0.03
CSMD1-210ENST00000521646 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
CSMD1-210ENST00000521646 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
CSMD1-210ENST00000521646 HS3ST6Q96QI5 342 aa15.24■□□□□ 0.03
CSMD1-210ENST00000521646 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
CSMD1-210ENST00000521646 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
CSMD1-210ENST00000521646 BCS1LQ9Y276 419 aa15.24■□□□□ 0.03
CSMD1-210ENST00000521646 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
CSMD1-210ENST00000521646 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
CSMD1-210ENST00000521646 IFFO2Q5TF58 517 aa15.23■□□□□ 0.03
CSMD1-210ENST00000521646 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
CSMD1-210ENST00000521646 LGR6Q9HBX8 967 aa15.23■□□□□ 0.03
CSMD1-210ENST00000521646 NMRK2Q9NPI5 230 aa15.23■□□□□ 0.03
CSMD1-210ENST00000521646 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
CSMD1-210ENST00000521646 CABP4P57796 275 aa15.22■□□□□ 0.03
CSMD1-210ENST00000521646 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
CSMD1-210ENST00000521646 MRC1P22897 1456 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.03
CSMD1-210ENST00000521646 CHRNA5P30532 468 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 MTHFSP49914 203 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 PRELPP51888 382 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 TGFB2P61812 414 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 FOXK1P85037 733 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 PLPP6Q8IY26 295 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
CSMD1-210ENST00000521646 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
CSMD1-210ENST00000521646 EIF4G2P78344 907 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSMD1-210ENST00000521646 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
CSMD1-210ENST00000521646 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
CSMD1-210ENST00000521646 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.2■□□□□ 0.02
CSMD1-210ENST00000521646 SBF1O95248 1867 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 POLRMTO00411 1230 aaKnown RBP15.19■□□□□ 0.02
CSMD1-210ENST00000521646 RFC4P35249 363 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 HTRA3P83110 453 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 DNAJC5GQ8N7S2 189 aa15.19■□□□□ 0.02
CSMD1-210ENST00000521646 KHSRPQ92945 711 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSMD1-210ENST00000521646 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 NRXN2Q9P2S2 1712 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 FCHSD2O94868 740 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
CSMD1-210ENST00000521646 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
CSMD1-210ENST00000521646 PDE4AP27815 886 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 TM4SF1P30408 202 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 DSG2Q14126 1118 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 AMOTQ4VCS5 1084 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 BCL2L12Q9HB09 334 aa15.18■□□□□ 0.02
CSMD1-210ENST00000521646 UBR2Q8IWV8 1755 aa15.17■□□□□ 0.02
CSMD1-210ENST00000521646 CARMIL3Q8ND23 1372 aa15.17■□□□□ 0.02
CSMD1-210ENST00000521646 C9orf131Q5VYM1 1079 aa15.17■□□□□ 0.02
CSMD1-210ENST00000521646 CCDC87Q9NVE4 849 aa15.17■□□□□ 0.02
CSMD1-210ENST00000521646 SOS1Q07889 1333 aaPredicted RBP15.17■□□□□ 0.02
CSMD1-210ENST00000521646 COL3A1P02461 1466 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-210ENST00000521646 SLC34A2O95436 690 aa15.16■□□□□ 0.02
CSMD1-210ENST00000521646 HMOX1P09601 288 aa15.16■□□□□ 0.02
CSMD1-210ENST00000521646 USPL1Q5W0Q7 1092 aa15.16■□□□□ 0.02
CSMD1-210ENST00000521646 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
CSMD1-210ENST00000521646 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
CSMD1-210ENST00000521646 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
CSMD1-210ENST00000521646 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
CSMD1-210ENST00000521646 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
CSMD1-210ENST00000521646 MTHFSDQ2M296 383 aaKnown RBP15.15■□□□□ 0.02
CSMD1-210ENST00000521646 C1orf141Q5JVX7 400 aa15.15■□□□□ 0.02
CSMD1-210ENST00000521646 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
CSMD1-210ENST00000521646 ZBTB1Q9Y2K1 713 aa15.15■□□□□ 0.02
CSMD1-210ENST00000521646 PCDHGA4Q9Y5G9 962 aa15.15■□□□□ 0.02
CSMD1-210ENST00000521646 WDR90Q96KV7 1748 aa15.14■□□□□ 0.01
CSMD1-210ENST00000521646 DLEC1Q9Y238 1755 aa15.14■□□□□ 0.01
CSMD1-210ENST00000521646 RASSF7Q02833 373 aa15.14■□□□□ 0.01
CSMD1-210ENST00000521646 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
CSMD1-210ENST00000521646 NFIXQ14938 502 aa15.13■□□□□ 0.01
CSMD1-210ENST00000521646 AKAP4Q5JQC9 854 aa15.13■□□□□ 0.01
CSMD1-210ENST00000521646 VARS2Q5ST30 1063 aaKnown RBP15.13■□□□□ 0.01
CSMD1-210ENST00000521646 ANKRD31Q8N7Z5 1873 aa15.13■□□□□ 0.01
CSMD1-210ENST00000521646 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
CSMD1-210ENST00000521646 TOMM70O94826 608 aa15.12■□□□□ 0.01
CSMD1-210ENST00000521646 NUDT7P0C024 238 aa15.12■□□□□ 0.01
CSMD1-210ENST00000521646 PIM2Q9P1W9 311 aa15.12■□□□□ 0.01
CSMD1-210ENST00000521646 COL11A2P13942 1736 aaPredicted RBP15.12■□□□□ 0.01
CSMD1-210ENST00000521646 COL15A1P39059 1388 aa15.11■□□□□ 0.01
CSMD1-210ENST00000521646 SIPA1L3O60292 1781 aaPredicted RBP15.11■□□□□ 0.01
CSMD1-210ENST00000521646 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
CSMD1-210ENST00000521646 DALRD3Q5D0E6 543 aaKnown RBP15.1■□□□□ 0.01
CSMD1-210ENST00000521646 RNF181Q9P0P0 153 aa15.1■□□□□ 0.01
CSMD1-210ENST00000521646 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
CSMD1-210ENST00000521646 NARFQ9UHQ1 456 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms