RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
NEFM-205ENST00000521540 ADCY9O60503 1353 aa16.19■□□□□ 0.18
NEFM-205ENST00000521540 RTN4Q9NQC3 1192 aaKnown RBP16.19■□□□□ 0.18
NEFM-205ENST00000521540 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
NEFM-205ENST00000521540 KCNQ3O43525 872 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
NEFM-205ENST00000521540 ATRNO75882 1429 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 NEK4P51957 841 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 CNTROBQ8N137 903 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 INTS4Q96HW7 963 aaKnown RBP16.18■□□□□ 0.18
NEFM-205ENST00000521540 ANO2Q9NQ90 1003 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
NEFM-205ENST00000521540 CUL4AQ13619 759 aa16.18■□□□□ 0.18
NEFM-205ENST00000521540 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
NEFM-205ENST00000521540 EVA1CP58658 441 aa16.17■□□□□ 0.18
NEFM-205ENST00000521540 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
NEFM-205ENST00000521540 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
NEFM-205ENST00000521540 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
NEFM-205ENST00000521540 VPS72Q15906 364 aa16.16■□□□□ 0.18
NEFM-205ENST00000521540 ZNF772Q68DY9 489 aaPredicted RBP16.16■□□□□ 0.18
NEFM-205ENST00000521540 PI4K2BQ8TCG2 481 aa16.16■□□□□ 0.18
NEFM-205ENST00000521540 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
NEFM-205ENST00000521540 NUTM1Q86Y26 1132 aa16.16■□□□□ 0.18
NEFM-205ENST00000521540 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
NEFM-205ENST00000521540 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
NEFM-205ENST00000521540 SCN11AQ9UI33 1791 aa16.15■□□□□ 0.18
NEFM-205ENST00000521540 GLRX3O76003 335 aaKnown RBP16.15■□□□□ 0.18
NEFM-205ENST00000521540 GPATCH3Q96I76 525 aa16.15■□□□□ 0.18
NEFM-205ENST00000521540 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
NEFM-205ENST00000521540 DDX21Q9NR30 783 aaKnown RBP eCLIP16.15■□□□□ 0.18
NEFM-205ENST00000521540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.18
NEFM-205ENST00000521540 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
NEFM-205ENST00000521540 GLI3P10071 1580 aa16.15■□□□□ 0.18
NEFM-205ENST00000521540 HSPA4P34932 840 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 TOM1L2Q6ZVM7 507 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 TRPC5Q9UL62 973 aaPredicted RBP16.14■□□□□ 0.17
NEFM-205ENST00000521540 UTYO14607 1347 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 SPATA31A5Q5VU36 1347 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 SPATA31A7Q8IWB4 1347 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
NEFM-205ENST00000521540 MCTP1Q6DN14 999 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 CLASRPQ8N2M8 674 aaKnown RBP16.14■□□□□ 0.17
NEFM-205ENST00000521540 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
NEFM-205ENST00000521540 SGSM2O43147 1006 aa16.13■□□□□ 0.17
NEFM-205ENST00000521540 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
NEFM-205ENST00000521540 RAPGEF4Q8WZA2 1011 aa16.13■□□□□ 0.17
NEFM-205ENST00000521540 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
NEFM-205ENST00000521540 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
NEFM-205ENST00000521540 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
NEFM-205ENST00000521540 RAD50Q92878 1312 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
NEFM-205ENST00000521540 LMBRD1Q9NUN5 540 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
NEFM-205ENST00000521540 ZNF445P59923 1031 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
NEFM-205ENST00000521540 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
NEFM-205ENST00000521540 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
NEFM-205ENST00000521540 GRM8O00222 908 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 ANXA1P04083 346 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 BRD1O95696 1058 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 ARXQ96QS3 562 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 SLC52A2Q9HAB3 445 aa16.1■□□□□ 0.17
NEFM-205ENST00000521540 HIP1O00291 1037 aa16.09■□□□□ 0.17
NEFM-205ENST00000521540 IFIT2P09913 472 aaKnown RBP16.09■□□□□ 0.17
NEFM-205ENST00000521540 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
NEFM-205ENST00000521540 THRAP3Q9Y2W1 955 aaKnown RBP16.09■□□□□ 0.17
NEFM-205ENST00000521540 PARP4Q9UKK3 1724 aaKnown RBP16.09■□□□□ 0.17
NEFM-205ENST00000521540 DISP2A7MBM2 1401 aa16.09■□□□□ 0.17
NEFM-205ENST00000521540 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 MBD3O95983 291 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 PROSER3Q2NL68 480 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 ZNF790Q6PG37 636 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 GAS2L3Q86XJ1 694 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 DIAPH3Q9NSV4 1193 aa16.08■□□□□ 0.17
NEFM-205ENST00000521540 MRC1P22897 1456 aa16.08■□□□□ 0.16
NEFM-205ENST00000521540 PHKG2P15735 406 aa16.08■□□□□ 0.16
NEFM-205ENST00000521540 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
NEFM-205ENST00000521540 PKP1Q13835 747 aa16.08■□□□□ 0.16
NEFM-205ENST00000521540 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
NEFM-205ENST00000521540 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
NEFM-205ENST00000521540 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
NEFM-205ENST00000521540 RBM6P78332 1123 aaKnown RBP16.07■□□□□ 0.16
NEFM-205ENST00000521540 PDIA6Q15084 440 aa16.07■□□□□ 0.16
NEFM-205ENST00000521540 C5P01031 1676 aa16.07■□□□□ 0.16
NEFM-205ENST00000521540 MEGF6O75095 1541 aa16.07■□□□□ 0.16
NEFM-205ENST00000521540 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms