RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
TRIM35-204ENST00000521283 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
TRIM35-204ENST00000521283 MAPK8IP3Q9UPT6 1336 aa13.49□□□□□ -0.25
TRIM35-204ENST00000521283 PHF14O94880 888 aa13.49□□□□□ -0.25
TRIM35-204ENST00000521283 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
TRIM35-204ENST00000521283 CD2APQ9Y5K6 639 aa13.49□□□□□ -0.25
TRIM35-204ENST00000521283 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
TRIM35-204ENST00000521283 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
TRIM35-204ENST00000521283 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
TRIM35-204ENST00000521283 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
TRIM35-204ENST00000521283 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
TRIM35-204ENST00000521283 MFRPQ9BY79 579 aa13.48□□□□□ -0.25
TRIM35-204ENST00000521283 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
TRIM35-204ENST00000521283 TJP1Q07157 1748 aa13.47□□□□□ -0.25
TRIM35-204ENST00000521283 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
TRIM35-204ENST00000521283 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
TRIM35-204ENST00000521283 A0A087WZG4 1122 aa13.46□□□□□ -0.25
TRIM35-204ENST00000521283 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-204ENST00000521283 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
TRIM35-204ENST00000521283 SLC39A6Q13433 755 aa13.46□□□□□ -0.25
TRIM35-204ENST00000521283 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
TRIM35-204ENST00000521283 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
TRIM35-204ENST00000521283 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
TRIM35-204ENST00000521283 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-204ENST00000521283 WDR43Q15061 677 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRIM35-204ENST00000521283 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
TRIM35-204ENST00000521283 NFE2L2Q16236 605 aa13.45□□□□□ -0.26
TRIM35-204ENST00000521283 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
TRIM35-204ENST00000521283 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
TRIM35-204ENST00000521283 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
TRIM35-204ENST00000521283 ZPR1O75312 459 aa13.44□□□□□ -0.26
TRIM35-204ENST00000521283 MSL1Q68DK7 614 aa13.44□□□□□ -0.26
TRIM35-204ENST00000521283 INTS5Q6P9B9 1019 aaKnown RBP13.44□□□□□ -0.26
TRIM35-204ENST00000521283 DNAJC10Q8IXB1 793 aa13.44□□□□□ -0.26
TRIM35-204ENST00000521283 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
TRIM35-204ENST00000521283 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
TRIM35-204ENST00000521283 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 MARVELD3Q96A59 401 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 CHD4Q14839 1912 aa13.43□□□□□ -0.26
TRIM35-204ENST00000521283 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
TRIM35-204ENST00000521283 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
TRIM35-204ENST00000521283 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
TRIM35-204ENST00000521283 GYS1P13807 737 aa13.42□□□□□ -0.26
TRIM35-204ENST00000521283 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
TRIM35-204ENST00000521283 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
TRIM35-204ENST00000521283 SOS1Q07889 1333 aaPredicted RBP13.41□□□□□ -0.26
TRIM35-204ENST00000521283 MMP10P09238 476 aa13.41□□□□□ -0.26
TRIM35-204ENST00000521283 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
TRIM35-204ENST00000521283 TGFB2P61812 414 aa13.41□□□□□ -0.26
TRIM35-204ENST00000521283 GPR162Q16538 588 aa13.41□□□□□ -0.26
TRIM35-204ENST00000521283 MCM10Q7L590 875 aa13.41□□□□□ -0.26
TRIM35-204ENST00000521283 NARFQ9UHQ1 456 aa13.41□□□□□ -0.26
TRIM35-204ENST00000521283 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
TRIM35-204ENST00000521283 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
TRIM35-204ENST00000521283 COL15A1P39059 1388 aa13.4□□□□□ -0.26
TRIM35-204ENST00000521283 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
TRIM35-204ENST00000521283 RIPK4P57078 832 aa13.39□□□□□ -0.27
TRIM35-204ENST00000521283 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
TRIM35-204ENST00000521283 YY1P25490 414 aa13.37□□□□□ -0.27
TRIM35-204ENST00000521283 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
TRIM35-204ENST00000521283 TM4SF1P30408 202 aa13.37□□□□□ -0.27
TRIM35-204ENST00000521283 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
TRIM35-204ENST00000521283 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 ANP32CO43423 234 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 DCTN1Q14203 1278 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 USPL1Q5W0Q7 1092 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 SMIM5Q71RC9 77 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 NLGN2Q8NFZ4 835 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
TRIM35-204ENST00000521283 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
TRIM35-204ENST00000521283 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
TRIM35-204ENST00000521283 ZNF652Q9Y2D9 606 aa13.35□□□□□ -0.27
TRIM35-204ENST00000521283 UTRNP46939 3433 aa13.35□□□□□ -0.27
TRIM35-204ENST00000521283 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
TRIM35-204ENST00000521283 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
TRIM35-204ENST00000521283 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
TRIM35-204ENST00000521283 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
TRIM35-204ENST00000521283 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
TRIM35-204ENST00000521283 POLRMTO00411 1230 aaKnown RBP13.33□□□□□ -0.28
TRIM35-204ENST00000521283 KCNQ3O43525 872 aa13.33□□□□□ -0.28
TRIM35-204ENST00000521283 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.28
TRIM35-204ENST00000521283 A1BGP04217 495 aa13.33□□□□□ -0.28
TRIM35-204ENST00000521283 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
TRIM35-204ENST00000521283 CHMP4AQ9BY43 222 aa13.33□□□□□ -0.28
TRIM35-204ENST00000521283 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
TRIM35-204ENST00000521283 DZIP3Q86Y13 1208 aaKnown RBP13.32□□□□□ -0.28
TRIM35-204ENST00000521283 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 EMP3P54852 163 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 NFIXQ14938 502 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 PIM2Q9P1W9 311 aa13.31□□□□□ -0.28
TRIM35-204ENST00000521283 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms