RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 GTF2E1P29083 439 aaPredicted RBP21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 NBPF15Q8N660 670 aa21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 KDM3BQ7LBC6 1761 aa21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 DLEC1Q9Y238 1755 aa21.22■□□□□ 0.99
IGHV3-42-201ENST00000520410 KIF3CO14782 793 aa21.21■□□□□ 0.99
IGHV3-42-201ENST00000520410 LMOD3Q0VAK6 560 aa21.21■□□□□ 0.99
IGHV3-42-201ENST00000520410 PDZRN3Q9UPQ7 1066 aa21.21■□□□□ 0.99
IGHV3-42-201ENST00000520410 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
IGHV3-42-201ENST00000520410 C21orf2O43822 256 aa21.2■□□□□ 0.98
IGHV3-42-201ENST00000520410 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
IGHV3-42-201ENST00000520410 CLEC4GQ6UXB4 293 aa21.19■□□□□ 0.98
IGHV3-42-201ENST00000520410 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
IGHV3-42-201ENST00000520410 ANKRD31Q8N7Z5 1873 aa21.19■□□□□ 0.98
IGHV3-42-201ENST00000520410 COL11A2P13942 1736 aaPredicted RBP21.18■□□□□ 0.98
IGHV3-42-201ENST00000520410 EIF2S2P20042 333 aaKnown RBP21.18■□□□□ 0.98
IGHV3-42-201ENST00000520410 LMNB1P20700 586 aa21.18■□□□□ 0.98
IGHV3-42-201ENST00000520410 HSPA6P17066 643 aa21.17■□□□□ 0.98
IGHV3-42-201ENST00000520410 TMPOP42166 694 aaKnown RBP21.17■□□□□ 0.98
IGHV3-42-201ENST00000520410 TPTE2Q6XPS3 522 aa21.17■□□□□ 0.98
IGHV3-42-201ENST00000520410 CNKSR1Q969H4 720 aa21.17■□□□□ 0.98
IGHV3-42-201ENST00000520410 ZBTB3Q9H5J0 574 aa21.17■□□□□ 0.98
IGHV3-42-201ENST00000520410 HLFQ16534 295 aa21.16■□□□□ 0.98
IGHV3-42-201ENST00000520410 MASTLQ96GX5 879 aa21.16■□□□□ 0.98
IGHV3-42-201ENST00000520410 TOMM70O94826 608 aa21.15■□□□□ 0.98
IGHV3-42-201ENST00000520410 NECTIN2Q92692 538 aa21.15■□□□□ 0.98
IGHV3-42-201ENST00000520410 RRAGCQ9HB90 399 aa21.15■□□□□ 0.98
IGHV3-42-201ENST00000520410 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
IGHV3-42-201ENST00000520410 GPTP24298 496 aa21.14■□□□□ 0.97
IGHV3-42-201ENST00000520410 STYK1Q6J9G0 422 aa21.14■□□□□ 0.97
IGHV3-42-201ENST00000520410 PRPF40BQ6NWY9 871 aaKnown RBP21.14■□□□□ 0.97
IGHV3-42-201ENST00000520410 RUNDC1Q96C34 613 aa21.14■□□□□ 0.97
IGHV3-42-201ENST00000520410 MAP3K15Q6ZN16 1313 aa21.13■□□□□ 0.97
IGHV3-42-201ENST00000520410 NFKBIEO00221 500 aa21.13■□□□□ 0.97
IGHV3-42-201ENST00000520410 SRGNP10124 158 aa21.13■□□□□ 0.97
IGHV3-42-201ENST00000520410 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
IGHV3-42-201ENST00000520410 TIAM2Q8IVF5 1701 aa21.12■□□□□ 0.97
IGHV3-42-201ENST00000520410 NYXQ9GZU5 481 aa21.12■□□□□ 0.97
IGHV3-42-201ENST00000520410 TAOK3Q9H2K8 898 aa21.12■□□□□ 0.97
IGHV3-42-201ENST00000520410 NPR1P16066 1061 aa21.11■□□□□ 0.97
IGHV3-42-201ENST00000520410 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
IGHV3-42-201ENST00000520410 NUTM1Q86Y26 1132 aa21.11■□□□□ 0.97
IGHV3-42-201ENST00000520410 SBF1O95248 1867 aa21.1■□□□□ 0.97
IGHV3-42-201ENST00000520410 ERFEQ4G0M1 354 aa21.1■□□□□ 0.97
IGHV3-42-201ENST00000520410 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
IGHV3-42-201ENST00000520410 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
IGHV3-42-201ENST00000520410 ZC3H4Q9UPT8 1303 aaKnown RBP21.09■□□□□ 0.97
IGHV3-42-201ENST00000520410 TNRC6CQ9HCJ0 1690 aaKnown RBP21.09■□□□□ 0.97
IGHV3-42-201ENST00000520410 ERVV-1B6SEH8 477 aa21.09■□□□□ 0.97
IGHV3-42-201ENST00000520410 ANXA1P04083 346 aa21.09■□□□□ 0.97
IGHV3-42-201ENST00000520410 PRELPP51888 382 aa21.09■□□□□ 0.97
IGHV3-42-201ENST00000520410 ERBB4Q15303 1308 aa21.08■□□□□ 0.97
IGHV3-42-201ENST00000520410 RGL2O15211 777 aa21.08■□□□□ 0.97
IGHV3-42-201ENST00000520410 AIMP1Q12904 312 aaKnown RBP21.08■□□□□ 0.97
IGHV3-42-201ENST00000520410 CCDC93Q567U6 631 aa21.08■□□□□ 0.97
IGHV3-42-201ENST00000520410 DPY19L2Q6NUT2 758 aa21.08■□□□□ 0.97
IGHV3-42-201ENST00000520410 GLTPD2A6NH11 291 aa21.07■□□□□ 0.96
IGHV3-42-201ENST00000520410 RBM46Q8TBY0 533 aaKnown RBP21.07■□□□□ 0.96
IGHV3-42-201ENST00000520410 RPGRQ92834 1020 aaKnown RBP21.07■□□□□ 0.96
IGHV3-42-201ENST00000520410 BABAM1Q9NWV8 329 aa21.06■□□□□ 0.96
IGHV3-42-201ENST00000520410 ABCC12Q96J65 1359 aa21.06■□□□□ 0.96
IGHV3-42-201ENST00000520410 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
IGHV3-42-201ENST00000520410 APLP1P51693 650 aa21.05■□□□□ 0.96
IGHV3-42-201ENST00000520410 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
IGHV3-42-201ENST00000520410 ALDH1B1P30837 517 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 KRT24Q2M2I5 525 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 PROSER3Q2NL68 480 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 PPP1R42Q7Z4L9 355 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 NUP98P52948 1817 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 UBN2Q6ZU65 1347 aa21.04■□□□□ 0.96
IGHV3-42-201ENST00000520410 ARFGEF2Q9Y6D5 1785 aa21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 TCERG1O14776 1098 aaKnown RBP21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 VEGFAP15692 232 aaPredicted RBP21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 SUSD4Q5VX71 490 aa21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 GIGYF2Q6Y7W6 1299 aaKnown RBP21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 TRIM35Q9UPQ4 493 aa21.03■□□□□ 0.96
IGHV3-42-201ENST00000520410 HDGFL1Q5TGJ6 251 aa21.02■□□□□ 0.96
IGHV3-42-201ENST00000520410 OLFM4Q6UX06 510 aa21.02■□□□□ 0.96
IGHV3-42-201ENST00000520410 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
IGHV3-42-201ENST00000520410 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
IGHV3-42-201ENST00000520410 FER1L6Q2WGJ9 1857 aa21.02■□□□□ 0.96
IGHV3-42-201ENST00000520410 LTBP3Q9NS15 1303 aa21.02■□□□□ 0.95
IGHV3-42-201ENST00000520410 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
IGHV3-42-201ENST00000520410 FSTL1Q12841 308 aa21.01■□□□□ 0.95
IGHV3-42-201ENST00000520410 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
IGHV3-42-201ENST00000520410 ZNF277Q9NRM2 450 aaPredicted RBP21.01■□□□□ 0.95
IGHV3-42-201ENST00000520410 FKBP4Q02790 459 aaKnown RBP eCLIP21■□□□□ 0.95
IGHV3-42-201ENST00000520410 PARP10Q53GL7 1025 aa21■□□□□ 0.95
IGHV3-42-201ENST00000520410 ZNF34Q8IZ26 560 aa21■□□□□ 0.95
IGHV3-42-201ENST00000520410 ZNF428Q96B54 188 aa21■□□□□ 0.95
IGHV3-42-201ENST00000520410 UTP14AQ9BVJ6 771 aaKnown RBP21■□□□□ 0.95
IGHV3-42-201ENST00000520410 CHPF2Q9P2E5 772 aa21■□□□□ 0.95
IGHV3-42-201ENST00000520410 CHL1O00533 1208 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 APAF1O14727 1248 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 NTSR2O95665 410 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 PDIA6Q15084 440 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 HSP90AB3PQ58FF7 597 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 RTKN2Q8IZC4 609 aa20.99■□□□□ 0.95
IGHV3-42-201ENST00000520410 RBM17Q96I25 401 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 1045.7 ms