RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TTC41PQ6P2S7 1318 aa31.35■■■□□ 2.61
COL13A1-213ENST00000520267 CABP4P57796 275 aa31.35■■■□□ 2.61
COL13A1-213ENST00000520267 FMNL2Q96PY5 1086 aa31.35■■■□□ 2.61
COL13A1-213ENST00000520267 NEURL1BA8MQ27 555 aa31.35■■■□□ 2.61
COL13A1-213ENST00000520267 CNTROBQ8N137 903 aa31.35■■■□□ 2.61
COL13A1-213ENST00000520267 ANAPC15P60006 121 aa31.34■■■□□ 2.61
COL13A1-213ENST00000520267 ERC1Q8IUD2 1116 aa31.34■■■□□ 2.61
COL13A1-213ENST00000520267 MYD88Q99836 296 aa31.34■■■□□ 2.61
COL13A1-213ENST00000520267 METTL22Q9BUU2 404 aaPredicted RBP31.34■■■□□ 2.61
COL13A1-213ENST00000520267 NEXNQ0ZGT2 675 aa31.33■■■□□ 2.61
COL13A1-213ENST00000520267 ZGPATQ8N5A5 531 aaKnown RBP31.33■■■□□ 2.61
COL13A1-213ENST00000520267 PRDM11Q9NQV5 511 aa31.33■■■□□ 2.61
COL13A1-213ENST00000520267 PARP4Q9UKK3 1724 aaKnown RBP31.33■■■□□ 2.61
COL13A1-213ENST00000520267 GLRX3O76003 335 aaKnown RBP31.32■■■□□ 2.6
COL13A1-213ENST00000520267 GCKRQ14397 625 aa31.32■■■□□ 2.6
COL13A1-213ENST00000520267 WDR17Q8IZU2 1322 aa31.32■■■□□ 2.6
COL13A1-213ENST00000520267 CLEC17AQ6ZS10 378 aa31.31■■■□□ 2.6
COL13A1-213ENST00000520267 SOS2Q07890 1332 aaPredicted RBP31.31■■■□□ 2.6
COL13A1-213ENST00000520267 GLI3P10071 1580 aa31.31■■■□□ 2.6
COL13A1-213ENST00000520267 ANKRD13DQ6ZTN6 518 aa31.31■■■□□ 2.6
COL13A1-213ENST00000520267 IL17RAQ96F46 866 aa31.31■■■□□ 2.6
COL13A1-213ENST00000520267 CWC22Q9HCG8 908 aaKnown RBP31.31■■■□□ 2.6
COL13A1-213ENST00000520267 SLAIN2Q9P270 581 aa31.31■■■□□ 2.6
COL13A1-213ENST00000520267 SGSM2O43147 1006 aa31.3■■■□□ 2.6
COL13A1-213ENST00000520267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.3■■■□□ 2.6
COL13A1-213ENST00000520267 EPB41L2O43491 1005 aaKnown RBP31.29■■■□□ 2.6
COL13A1-213ENST00000520267 SASH1O94885 1247 aa31.29■■■□□ 2.6
COL13A1-213ENST00000520267 TOM1L2Q6ZVM7 507 aa31.29■■■□□ 2.6
COL13A1-213ENST00000520267 CYP2E1P05181 493 aaPredicted RBP31.29■■■□□ 2.6
COL13A1-213ENST00000520267 NUCB2P80303 420 aa31.29■■■□□ 2.6
COL13A1-213ENST00000520267 ECHDC1Q9NTX5 307 aa31.29■■■□□ 2.6
COL13A1-213ENST00000520267 ZNF335Q9H4Z2 1342 aaPredicted RBP31.28■■■□□ 2.6
COL13A1-213ENST00000520267 IFIT2P09913 472 aaKnown RBP31.28■■■□□ 2.6
COL13A1-213ENST00000520267 PKP1Q13835 747 aa31.28■■■□□ 2.6
COL13A1-213ENST00000520267 LAMB4A4D0S4 1761 aa31.28■■■□□ 2.6
COL13A1-213ENST00000520267 HSPA4P34932 840 aa31.27■■■□□ 2.6
COL13A1-213ENST00000520267 G3BP1Q13283 466 aaKnown RBP eCLIP31.27■■■□□ 2.6
COL13A1-213ENST00000520267 AACSQ86V21 672 aa31.27■■■□□ 2.6
COL13A1-213ENST00000520267 TMX3Q96JJ7 454 aa31.27■■■□□ 2.6
COL13A1-213ENST00000520267 AFDNP55196 1824 aaKnown RBP31.27■■■□□ 2.6
COL13A1-213ENST00000520267 BAG4O95429 457 aaKnown RBP31.27■■■□□ 2.6
COL13A1-213ENST00000520267 EPHA10Q5JZY3 1008 aa31.27■■■□□ 2.6
COL13A1-213ENST00000520267 ARFGEF2Q9Y6D5 1785 aa31.26■■■□□ 2.6
COL13A1-213ENST00000520267 COL5A2P05997 1499 aaPredicted RBP31.26■■■□□ 2.59
COL13A1-213ENST00000520267 L1TD1Q5T7N2 865 aaKnown RBP31.26■■■□□ 2.59
COL13A1-213ENST00000520267 ZCRB1Q8TBF4 217 aaKnown RBP31.26■■■□□ 2.59
COL13A1-213ENST00000520267 FSD2A1L4K1 749 aa31.26■■■□□ 2.59
COL13A1-213ENST00000520267 MCM2P49736 904 aa31.26■■■□□ 2.59
COL13A1-213ENST00000520267 RAD50Q92878 1312 aa31.25■■■□□ 2.59
COL13A1-213ENST00000520267 PCDH11XQ9BZA7 1347 aa31.25■■■□□ 2.59
COL13A1-213ENST00000520267 PCDH11YQ9BZA8 1340 aa31.25■■■□□ 2.59
COL13A1-213ENST00000520267 CWC27Q6UX04 472 aaKnown RBP31.24■■■□□ 2.59
COL13A1-213ENST00000520267 GPATCH3Q96I76 525 aa31.24■■■□□ 2.59
COL13A1-213ENST00000520267 LSG1Q9H089 658 aaKnown RBP31.24■■■□□ 2.59
COL13A1-213ENST00000520267 ABCA3Q99758 1704 aa31.24■■■□□ 2.59
COL13A1-213ENST00000520267 PTMSP20962 102 aa31.24■■■□□ 2.59
COL13A1-213ENST00000520267 KLHDC4Q8TBB5 520 aa31.24■■■□□ 2.59
COL13A1-213ENST00000520267 JARID2Q92833 1246 aaPredicted RBP31.24■■■□□ 2.59
COL13A1-213ENST00000520267 EAF2Q96CJ1 260 aaPredicted RBP31.24■■■□□ 2.59
COL13A1-213ENST00000520267 SIL1Q9H173 461 aa31.24■■■□□ 2.59
COL13A1-213ENST00000520267 GOLGA6L3A6NEY3 463 aa31.23■■■□□ 2.59
COL13A1-213ENST00000520267 UPF3BQ9BZI7 483 aaKnown RBP31.23■■■□□ 2.59
COL13A1-213ENST00000520267 SKOR2Q2VWA4 1001 aaPredicted RBP31.22■■■□□ 2.59
COL13A1-213ENST00000520267 ARXQ96QS3 562 aa31.22■■■□□ 2.59
COL13A1-213ENST00000520267 CCDC8Q9H0W5 538 aaPredicted RBP31.21■■■□□ 2.59
COL13A1-213ENST00000520267 NOL8Q76FK4 1167 aaKnown RBP31.2■■■□□ 2.59
COL13A1-213ENST00000520267 ZDHHC9Q9Y397 364 aa31.2■■■□□ 2.59
COL13A1-213ENST00000520267 GOLGA6L22H0YM25 854 aa31.19■■■□□ 2.58
COL13A1-213ENST00000520267 CUL4AQ13619 759 aa31.19■■■□□ 2.58
COL13A1-213ENST00000520267 DIAPH3Q9NSV4 1193 aa31.19■■■□□ 2.58
COL13A1-213ENST00000520267 UBR2Q8IWV8 1755 aa31.19■■■□□ 2.58
COL13A1-213ENST00000520267 ATP5J2-PTCD1G3V325 749 aa31.19■■■□□ 2.58
COL13A1-213ENST00000520267 PTCD1O75127 700 aaKnown RBP31.19■■■□□ 2.58
COL13A1-213ENST00000520267 TLR7Q9NYK1 1049 aaKnown RBP31.19■■■□□ 2.58
COL13A1-213ENST00000520267 SHANK3Q9BYB0 1731 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 KDM4FA0A1W2PPD8 638 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 NBPF26B4DH59 902 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 NBPF14Q5TI25 921 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 NBPF10Q6P3W6 841 aaKnown RBP31.18■■■□□ 2.58
COL13A1-213ENST00000520267 KIAA1211Q6ZU35 1233 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 NBPF15Q8N660 670 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 PLBD2Q8NHP8 589 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 SNX14Q9Y5W7 946 aa31.18■■■□□ 2.58
COL13A1-213ENST00000520267 ERVV-2B6SEH9 535 aa31.17■■■□□ 2.58
COL13A1-213ENST00000520267 IL2RBP14784 551 aa31.17■■■□□ 2.58
COL13A1-213ENST00000520267 EVI5LQ96CN4 794 aa31.17■■■□□ 2.58
COL13A1-213ENST00000520267 CARD10Q9BWT7 1032 aa31.17■■■□□ 2.58
COL13A1-213ENST00000520267 UBE3BQ7Z3V4 1068 aa31.17■■■□□ 2.58
COL13A1-213ENST00000520267 MCTP1Q6DN14 999 aa31.16■■■□□ 2.58
COL13A1-213ENST00000520267 STRN4Q9NRL3 753 aa31.16■■■□□ 2.58
COL13A1-213ENST00000520267 XRCC6P12956 609 aaKnown RBP eCLIP31.15■■■□□ 2.58
COL13A1-213ENST00000520267 NKX1-1Q15270 411 aaPredicted RBP31.15■■■□□ 2.58
COL13A1-213ENST00000520267 RFX5P48382 616 aaPredicted RBP31.15■■■□□ 2.58
COL13A1-213ENST00000520267 RASEFQ8IZ41 740 aa31.15■■■□□ 2.58
COL13A1-213ENST00000520267 RUFY2Q8WXA3 655 aa31.15■■■□□ 2.58
COL13A1-213ENST00000520267 DDX54Q8TDD1 881 aaKnown RBP31.14■■■□□ 2.58
COL13A1-213ENST00000520267 KCPQ6ZWJ8 1503 aa31.14■■■□□ 2.58
COL13A1-213ENST00000520267 A0A087WZG4 1122 aa31.14■■■□□ 2.58
COL13A1-213ENST00000520267 COPRSQ9NQ92 184 aa31.14■■■□□ 2.58
COL13A1-213ENST00000520267 PAPPAQ13219 1627 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms