RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CLN3Q13286 438 aa6.32□□□□□ -1.4
HMGB1P41-201ENST00000520234 LARGE2Q8N3Y3 721 aa6.32□□□□□ -1.4
HMGB1P41-201ENST00000520234 FAM196BA6NMK8 535 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 ATG7O95352 703 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 RASA1P20936 1047 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 EFHC2Q5JST6 749 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 OGFOD1Q8N543 542 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 OSBPL3Q9H4L5 887 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 AVENQ9NQS1 362 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 PCDHGA11Q9Y5H2 935 aa6.31□□□□□ -1.4
HMGB1P41-201ENST00000520234 BNIP3LO60238 219 aa6.3□□□□□ -1.4
HMGB1P41-201ENST00000520234 GNRH1P01148 92 aa6.3□□□□□ -1.4
HMGB1P41-201ENST00000520234 ELOAQ14241 798 aaKnown RBP6.3□□□□□ -1.4
HMGB1P41-201ENST00000520234 RBM19Q9Y4C8 960 aaKnown RBP6.3□□□□□ -1.4
HMGB1P41-201ENST00000520234 CLDN10P78369 228 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 PSME1Q06323 249 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 PTK7Q13308 1070 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 ESCO1Q5FWF5 840 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 SIX5Q8N196 739 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 RNF112Q9ULX5 631 aa6.29□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L10C9JJH3 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L12C9JPN9 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L21D6R901 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 CDCA8Q53HL2 280 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 CCDC102BQ68D86 513 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 KRTAP17-1Q9BYP8 105 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 RUBCNLQ9H714 662 aa6.28□□□□□ -1.4
HMGB1P41-201ENST00000520234 BACH1O14867 736 aa6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 IRAK1P51617 712 aa6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 PDE4CQ08493 712 aa6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 CRTC2Q53ET0 693 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 ANKMY2Q8IV38 441 aa6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 RNF114Q9Y508 228 aa6.27□□□□□ -1.41
HMGB1P41-201ENST00000520234 M0R2N6 131 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 SEC13P55735 322 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 FIGNL1Q6PIW4 674 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 TPCN2Q8NHX9 752 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 FAM200AQ8TCP9 573 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 ZNF594Q96JF6 807 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 NOVA2Q9UNW9 492 aaKnown RBP6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
HMGB1P41-201ENST00000520234 DKK1O94907 266 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 INHAP05111 366 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 SCNN1DP51172 638 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 GDF10P55107 478 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 DPYDQ12882 1025 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 XAGE2Q96GT9 111 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 ARXQ96QS3 562 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 KLF15Q9UIH9 416 aa6.25□□□□□ -1.41
HMGB1P41-201ENST00000520234 TMEM229AB2RXF0 380 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 C9orf172C9J069 976 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 TRIM28Q13263 835 aaKnown RBP6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 ADGRE1Q14246 886 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 FAM182BQ5T319 152 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 CNKSR1Q969H4 720 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 SLC4A9Q96Q91 983 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 ESYT1Q9BSJ8 1104 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 CRISPLD1Q9H336 500 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 PCMTD2Q9NV79 361 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 USTQ9Y2C2 406 aa6.24□□□□□ -1.41
HMGB1P41-201ENST00000520234 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 MSX1P28360 303 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 PHKA2P46019 1235 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 SWI5Q1ZZU3 235 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 ZNF358Q9NW07 568 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 ZMIZ1Q9ULJ6 1067 aa6.23□□□□□ -1.41
HMGB1P41-201ENST00000520234 IL2RAP01589 272 aa6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 TAL1P17542 331 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 TXNRD3Q86VQ6 643 aa6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 RAB6BQ9NRW1 208 aa6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 PCDHGC4Q9Y5F7 938 aa6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 HRH3Q9Y5N1 445 aa6.22□□□□□ -1.41
HMGB1P41-201ENST00000520234 SFI1A8K8P3 1242 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 SMTNP53814 917 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 JAG1P78504 1218 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 CENPCQ03188 943 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 GRIK4Q16099 956 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 GNASQ5JWF2 1037 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 RETREG2Q8NC44 543 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
HMGB1P41-201ENST00000520234 TP53INP1Q96A56 240 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms