RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 NBPF14Q5TI25 921 aa6.67□□□□□ -1.34
SDC2-204ENST00000519914 C14orf93Q9H972 538 aaKnown RBP6.67□□□□□ -1.34
SDC2-204ENST00000519914 ADGRF5Q8IZF2 1346 aa6.67□□□□□ -1.34
SDC2-204ENST00000519914 POLR3AO14802 1390 aaPredicted RBP6.67□□□□□ -1.34
SDC2-204ENST00000519914 FIGNL2A6NMB9 653 aa6.66□□□□□ -1.34
SDC2-204ENST00000519914 SH3BP5LQ7L8J4 393 aa6.66□□□□□ -1.34
SDC2-204ENST00000519914 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
SDC2-204ENST00000519914 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
SDC2-204ENST00000519914 CLTCQ00610 1675 aaKnown RBP6.66□□□□□ -1.34
SDC2-204ENST00000519914 SHPRHQ149N8 1683 aa6.66□□□□□ -1.34
SDC2-204ENST00000519914 PREX1Q8TCU6 1659 aa6.65□□□□□ -1.34
SDC2-204ENST00000519914 PPFIA3O75145 1194 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 TUSC1Q2TAM9 212 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 CC2D1BQ5T0F9 858 aaKnown RBP6.65□□□□□ -1.35
SDC2-204ENST00000519914 CFAP70Q5T0N1 1121 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 MEIOBQ8N635 442 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 C1QTNF2Q9BXJ5 285 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 PLEKHH1Q9ULM0 1364 aa6.65□□□□□ -1.35
SDC2-204ENST00000519914 CFAP65Q6ZU64 1925 aaKnown RBP6.64□□□□□ -1.35
SDC2-204ENST00000519914 CBLBQ13191 982 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 CCDC116Q8IYX3 515 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 CCDC136Q96JN2 1154 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 DNMT3LQ9UJW3 386 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 EMILIN1Q9Y6C2 1016 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 CENPJQ9HC77 1338 aaPredicted RBP6.64□□□□□ -1.35
SDC2-204ENST00000519914 NSD2O96028 1365 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 NINLQ9Y2I6 1382 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 AGLP35573 1532 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 TMEM131LA2VDJ0 1609 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 ANKRD26Q9UPS8 1709 aa6.64□□□□□ -1.35
SDC2-204ENST00000519914 TCERG1O14776 1098 aaKnown RBP6.63□□□□□ -1.35
SDC2-204ENST00000519914 ERFEQ4G0M1 354 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 DUSP27Q5VZP5 1158 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 TSEN34Q9BSV6 310 aaKnown RBP6.63□□□□□ -1.35
SDC2-204ENST00000519914 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 SOS2Q07890 1332 aaPredicted RBP6.63□□□□□ -1.35
SDC2-204ENST00000519914 IQSEC2Q5JU85 1478 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 TULP4Q9NRJ4 1543 aa6.63□□□□□ -1.35
SDC2-204ENST00000519914 MYO5BQ9ULV0 1848 aa6.62□□□□□ -1.35
SDC2-204ENST00000519914 MED14O60244 1454 aa6.62□□□□□ -1.35
SDC2-204ENST00000519914 SLFN5Q08AF3 891 aa6.62□□□□□ -1.35
SDC2-204ENST00000519914 PPP1R26Q5T8A7 1209 aaPredicted RBP6.62□□□□□ -1.35
SDC2-204ENST00000519914 TRMT44Q8IYL2 757 aaKnown RBP6.62□□□□□ -1.35
SDC2-204ENST00000519914 PROCA1Q8NCQ7 364 aaPredicted RBP6.62□□□□□ -1.35
SDC2-204ENST00000519914 MAP4K5Q9Y4K4 846 aa6.62□□□□□ -1.35
SDC2-204ENST00000519914 ADGRB2O60241 1585 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 TTLL8A6PVC2 850 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
SDC2-204ENST00000519914 NR6A1Q15406 480 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 FBXO31Q5XUX0 539 aaPredicted RBP6.61□□□□□ -1.35
SDC2-204ENST00000519914 ZBTB33Q86T24 672 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 EXOC6Q8TAG9 804 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 DIP2BQ9P265 1576 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 DLC1Q96QB1 1528 aa6.61□□□□□ -1.35
SDC2-204ENST00000519914 NKTRP30414 1462 aaKnown RBP6.6□□□□□ -1.35
SDC2-204ENST00000519914 ANKRD36BQ8N2N9 1353 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 KDM2BQ8NHM5 1336 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 VSIG8P0DPA2 414 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 CNGB1Q14028 1251 aaPredicted RBP6.6□□□□□ -1.35
SDC2-204ENST00000519914 GPR161Q8N6U8 529 aaKnown RBP6.6□□□□□ -1.35
SDC2-204ENST00000519914 AGBL1Q96MI9 1066 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 KCTD15Q96SI1 283 aaPredicted RBP6.6□□□□□ -1.35
SDC2-204ENST00000519914 PGPEP1Q9NXJ5 209 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 FKBPLQ9UIM3 349 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 SETD1AO15047 1707 aaKnown RBP6.6□□□□□ -1.35
SDC2-204ENST00000519914 NSD3Q9BZ95 1437 aa6.6□□□□□ -1.35
SDC2-204ENST00000519914 E9PSI1 815 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
SDC2-204ENST00000519914 RAB15P59190 212 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 PTSQ03393 145 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.59□□□□□ -1.354e-11■■□□□ 12.8
SDC2-204ENST00000519914 PDXDC2PQ6P474 469 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 GPKOWQ92917 476 aaPredicted RBP eCLIP6.59□□□□□ -1.35
SDC2-204ENST00000519914 SLC10A4Q96EP9 437 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 CNTNAP3BQ96NU0 1288 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 CNTNAP3Q9BZ76 1288 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 GPBP1L1Q9HC44 474 aaPredicted RBP6.59□□□□□ -1.35
SDC2-204ENST00000519914 SPATA31D1Q6ZQQ2 1576 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 VIRMAQ69YN4 1812 aaKnown RBP6.59□□□□□ -1.35
SDC2-204ENST00000519914 PTPRMP28827 1452 aa6.59□□□□□ -1.35
SDC2-204ENST00000519914 AP1G2O75843 785 aa6.58□□□□□ -1.36
SDC2-204ENST00000519914 RELBQ01201 579 aa6.58□□□□□ -1.36
SDC2-204ENST00000519914 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.58□□□□□ -1.36
SDC2-204ENST00000519914 UBE2Q2Q8WVN8 375 aa6.58□□□□□ -1.36
SDC2-204ENST00000519914 YEATS2Q9ULM3 1422 aa6.58□□□□□ -1.36
SDC2-204ENST00000519914 ABCC11Q96J66 1382 aa6.58□□□□□ -1.36
SDC2-204ENST00000519914 CDC42BPGQ6DT37 1551 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 EVC2Q86UK5 1308 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 AAMPQ13685 434 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 SKIV2LQ15477 1246 aaKnown RBP6.57□□□□□ -1.36
SDC2-204ENST00000519914 CRBNQ96SW2 442 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 FAM117AQ9C073 453 aa6.57□□□□□ -1.36
SDC2-204ENST00000519914 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
SDC2-204ENST00000519914 KNDC1Q76NI1 1749 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms