RNA–Protein interactions for RNA: ENST00000519771.5

POLB-207, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-207ENST00000519771 XAGE2Q96GT9 111 aa10.96□□□□□ -0.65
POLB-207ENST00000519771 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 WASLO00401 505 aaPredicted RBP10.95□□□□□ -0.66
POLB-207ENST00000519771 MAN1A2O60476 641 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 GPC1P35052 558 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 TRIM46Q7Z4K8 759 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
POLB-207ENST00000519771 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
POLB-207ENST00000519771 SFI1A8K8P3 1242 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 SCNN1DP51172 638 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 CENPCQ03188 943 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 CFAP74Q9C0B2 1584 aa10.94□□□□□ -0.66
POLB-207ENST00000519771 IL2RAP01589 272 aa10.93□□□□□ -0.66
POLB-207ENST00000519771 SMTNP53814 917 aa10.93□□□□□ -0.66
POLB-207ENST00000519771 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
POLB-207ENST00000519771 NBPF15Q8N660 670 aa10.93□□□□□ -0.66
POLB-207ENST00000519771 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
POLB-207ENST00000519771 TMEM229AB2RXF0 380 aa10.92□□□□□ -0.66
POLB-207ENST00000519771 M0R2N6 131 aa10.92□□□□□ -0.66
POLB-207ENST00000519771 STAU1O95793 577 aaKnown RBP10.92□□□□□ -0.66
POLB-207ENST00000519771 CTSOP43234 321 aaPredicted RBP10.92□□□□□ -0.66
POLB-207ENST00000519771 RNF144AP50876 292 aaPredicted RBP10.92□□□□□ -0.66
POLB-207ENST00000519771 KDF1Q8NAX2 398 aaPredicted RBP10.92□□□□□ -0.66
POLB-207ENST00000519771 FIGNL2A6NMB9 653 aa10.91□□□□□ -0.66
POLB-207ENST00000519771 C11orf95C9JLR9 678 aaPredicted RBP10.91□□□□□ -0.66
POLB-207ENST00000519771 LYSMD3Q7Z3D4 306 aa10.91□□□□□ -0.66
POLB-207ENST00000519771 DACH1Q9UI36 760 aa10.91□□□□□ -0.66
POLB-207ENST00000519771 PLCH2O75038 1416 aa10.91□□□□□ -0.66
POLB-207ENST00000519771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.9□□□□□ -0.66
POLB-207ENST00000519771 CTTNBP2Q8WZ74 1663 aa10.9□□□□□ -0.66
POLB-207ENST00000519771 A6NJY4 79 aa10.9□□□□□ -0.66
POLB-207ENST00000519771 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.66
POLB-207ENST00000519771 SLC4A9Q96Q91 983 aa10.9□□□□□ -0.66
POLB-207ENST00000519771 RGS17Q9UGC6 210 aaPredicted RBP10.9□□□□□ -0.66
POLB-207ENST00000519771 RAPGEF6Q8TEU7 1601 aa10.89□□□□□ -0.67
POLB-207ENST00000519771 SWI5Q1ZZU3 235 aa10.89□□□□□ -0.67
POLB-207ENST00000519771 PRICKLE2Q7Z3G6 844 aa10.89□□□□□ -0.67
POLB-207ENST00000519771 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
POLB-207ENST00000519771 TSEN2Q8NCE0 465 aaKnown RBP10.89□□□□□ -0.67
POLB-207ENST00000519771 SOS2Q07890 1332 aaPredicted RBP10.88□□□□□ -0.67
POLB-207ENST00000519771 NUP153P49790 1475 aaKnown RBP10.88□□□□□ -0.67
POLB-207ENST00000519771 CDK2AP1O14519 115 aa10.88□□□□□ -0.67
POLB-207ENST00000519771 GMPR2Q9P2T1 348 aaKnown RBP10.88□□□□□ -0.67
POLB-207ENST00000519771 ZMYM3Q14202 1370 aa10.88□□□□□ -0.67
POLB-207ENST00000519771 PTPRKQ15262 1439 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 RNF217Q8TC41 542 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 ARXQ96QS3 562 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 NIFKQ9BYG3 293 aaKnown RBP10.87□□□□□ -0.67
POLB-207ENST00000519771 CABP1Q9NZU7 370 aa10.87□□□□□ -0.67
POLB-207ENST00000519771 TMEM164Q5U3C3 297 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 TAS1R3Q7RTX0 852 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 GRIP2Q9C0E4 1043 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 ZMIZ1Q9ULJ6 1067 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 CDK11AQ9UQ88 783 aaPredicted RBP10.86□□□□□ -0.67
POLB-207ENST00000519771 USTQ9Y2C2 406 aa10.86□□□□□ -0.67
POLB-207ENST00000519771 FOXD4L5Q5VV16 416 aaPredicted RBP10.85□□□□□ -0.67
POLB-207ENST00000519771 POTEAQ6S8J7 498 aa10.85□□□□□ -0.67
POLB-207ENST00000519771 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
POLB-207ENST00000519771 SCHIP1Q9P0W5 487 aaPredicted RBP10.85□□□□□ -0.67
POLB-207ENST00000519771 ZNF232Q9UNY5 417 aa10.85□□□□□ -0.67
POLB-207ENST00000519771 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
POLB-207ENST00000519771 C3P01024 1663 aa10.85□□□□□ -0.67
POLB-207ENST00000519771 NPATQ14207 1427 aa10.84□□□□□ -0.67
POLB-207ENST00000519771 B4GALNT3Q6L9W6 998 aa10.84□□□□□ -0.67
POLB-207ENST00000519771 RETREG2Q8NC44 543 aa10.84□□□□□ -0.67
POLB-207ENST00000519771 GAS2L2Q8NHY3 880 aa10.84□□□□□ -0.67
POLB-207ENST00000519771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.674e-44■■■■■ 720.4
POLB-207ENST00000519771 PPP1R12BO60237 982 aaPredicted RBP10.83□□□□□ -0.68
POLB-207ENST00000519771 DKK1O94907 266 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 POU4F2Q12837 409 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 MTFR1Q15390 333 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 SLC9A9Q8IVB4 645 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 SCG3Q8WXD2 468 aaKnown RBP10.83□□□□□ -0.68
POLB-207ENST00000519771 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 FHDC1Q9C0D6 1143 aaPredicted RBP10.83□□□□□ -0.68
POLB-207ENST00000519771 HRH3Q9Y5N1 445 aa10.83□□□□□ -0.68
POLB-207ENST00000519771 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
POLB-207ENST00000519771 PHKA2P46019 1235 aa10.82□□□□□ -0.68
POLB-207ENST00000519771 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
POLB-207ENST00000519771 TIMMDC1Q9NPL8 285 aa10.82□□□□□ -0.68
POLB-207ENST00000519771 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
POLB-207ENST00000519771 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 PRMT3O60678 531 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
POLB-207ENST00000519771 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 ZNF787Q6DD87 383 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 NBPF10Q6P3W6 841 aaKnown RBP10.81□□□□□ -0.68
POLB-207ENST00000519771 GGT6Q6P531 493 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 ANKLE2Q86XL3 938 aa10.81□□□□□ -0.68
POLB-207ENST00000519771 TSPAN10Q9H1Z9 355 aaPredicted RBP10.81□□□□□ -0.68
POLB-207ENST00000519771 SHANK2Q9UPX8 1470 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms