RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 NAA25Q14CX7 972 aa14.1□□□□□ -0.15
SHPRH-207ENST00000519632 ESYT1Q9BSJ8 1104 aa14.1□□□□□ -0.15
SHPRH-207ENST00000519632 CPSF2Q9P2I0 782 aaKnown RBP14.1□□□□□ -0.15
SHPRH-207ENST00000519632 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
SHPRH-207ENST00000519632 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
SHPRH-207ENST00000519632 CERS3Q8IU89 383 aa14.1□□□□□ -0.15
SHPRH-207ENST00000519632 AMOTL1Q8IY63 956 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 PPP2R3AQ06190 1150 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 USP26Q9BXU7 913 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 RBM28Q9NW13 759 aaKnown RBP14.09□□□□□ -0.15
SHPRH-207ENST00000519632 CTNNA3Q9UI47 895 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 EHBP1Q8NDI1 1231 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
SHPRH-207ENST00000519632 FAM76AQ8TAV0 307 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 SULT6B1Q6IMI4 303 aa14.09□□□□□ -0.15
SHPRH-207ENST00000519632 MKRN1Q9UHC7 482 aaKnown RBP14.09□□□□□ -0.15
SHPRH-207ENST00000519632 HLTFQ14527 1009 aaKnown RBP eCLIP14.08□□□□□ -0.153e-6■■□□□ 13
SHPRH-207ENST00000519632 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 ISM2Q6H9L7 571 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 AFAP1Q8N556 730 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 CDK5RAP3Q96JB5 506 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 CCDC114Q96M63 670 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 TROQ12816 1431 aaPredicted RBP14.08□□□□□ -0.15
SHPRH-207ENST00000519632 DISP3Q9P2K9 1392 aa14.08□□□□□ -0.15
SHPRH-207ENST00000519632 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.16
SHPRH-207ENST00000519632 JADE2Q9NQC1 790 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 SPECC1Q5M775 1068 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 HMGB1P09429 215 aaKnown RBP14.08□□□□□ -0.16
SHPRH-207ENST00000519632 WASF1Q92558 559 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 PUF60Q9UHX1 559 aaKnown RBP14.08□□□□□ -0.16
SHPRH-207ENST00000519632 INPP5BP32019 993 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 ZNF75DP51815 510 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 PSME1Q06323 249 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 NECAB1Q8N987 351 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.16
SHPRH-207ENST00000519632 IL16Q14005 1332 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 ZBTB9Q96C00 473 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 RHOXF2BP0C7M4 288 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 RHOXF2Q9BQY4 288 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 TSHZ3Q63HK5 1081 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 NEK11Q8NG66 645 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
SHPRH-207ENST00000519632 GCOM1H8Y6P7 765 aaPredicted RBP14.06□□□□□ -0.16
SHPRH-207ENST00000519632 MYZAPP0CAP1 466 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 PRG4Q92954 1404 aaPredicted RBP14.06□□□□□ -0.16
SHPRH-207ENST00000519632 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHPRH-207ENST00000519632 B4GALNT4Q76KP1 1039 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 IFNKQ9P0W0 207 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
SHPRH-207ENST00000519632 MRPS27Q92552 414 aaKnown RBP14.06□□□□□ -0.16
SHPRH-207ENST00000519632 CARD6Q9BX69 1037 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 ANTXR1Q9H6X2 564 aa14.06□□□□□ -0.16
SHPRH-207ENST00000519632 ANKRD62A6NC57 917 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 PDE1AP54750 535 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 EVA1CP58658 441 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 EFCC1Q9HA90 598 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
SHPRH-207ENST00000519632 ERBB4Q15303 1308 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 CCDC178Q5BJE1 867 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 FKBP15Q5T1M5 1219 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
SHPRH-207ENST00000519632 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
SHPRH-207ENST00000519632 CCDC141Q6ZP82 1450 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 G3V3G9 751 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 ZEB2O60315 1214 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 LMOD1P29536 600 aaPredicted RBP14.04□□□□□ -0.16
SHPRH-207ENST00000519632 DNA2P51530 1060 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 SYCP1Q15431 976 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 CCDC158Q5M9N0 1113 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 CCDC102BQ68D86 513 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 KARSQ15046 597 aaKnown RBP14.04□□□□□ -0.16
SHPRH-207ENST00000519632 UTP14AQ9BVJ6 771 aaKnown RBP14.04□□□□□ -0.16
SHPRH-207ENST00000519632 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 PTPRCP08575 1304 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.165e-7■■■■□ 19.8
SHPRH-207ENST00000519632 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
SHPRH-207ENST00000519632 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
SHPRH-207ENST00000519632 TTC39AQ5SRH9 613 aa14.03□□□□□ -0.16
SHPRH-207ENST00000519632 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
SHPRH-207ENST00000519632 CCT2P78371 535 aaKnown RBP14.03□□□□□ -0.16
SHPRH-207ENST00000519632 GOLGA5Q8TBA6 731 aa14.03□□□□□ -0.16
SHPRH-207ENST00000519632 ZNF215Q9UL58 517 aaPredicted RBP14.03□□□□□ -0.16
SHPRH-207ENST00000519632 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
SHPRH-207ENST00000519632 CBX8Q9HC52 389 aa14.03□□□□□ -0.16
SHPRH-207ENST00000519632 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
SHPRH-207ENST00000519632 GADD45BO75293 160 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms