RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 PHF14O94880 888 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 MS4A1P11836 297 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
SDC2-203ENST00000519587 TRAPPC3LQ5T215 181 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 ZKSCAN2Q63HK3 967 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 COPS6Q7L5N1 327 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
SDC2-203ENST00000519587 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
SDC2-203ENST00000519587 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
SDC2-203ENST00000519587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
SDC2-203ENST00000519587 RGL2O15211 777 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 RFC4P35249 363 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 SLC15A2Q16348 729 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 G2E3Q7L622 706 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
SDC2-203ENST00000519587 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
SDC2-203ENST00000519587 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
SDC2-203ENST00000519587 ZPR1O75312 459 aa17.97■□□□□ 0.47
SDC2-203ENST00000519587 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
SDC2-203ENST00000519587 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
SDC2-203ENST00000519587 NUP98P52948 1817 aa17.97■□□□□ 0.47
SDC2-203ENST00000519587 ERVV-1B6SEH8 477 aa17.96■□□□□ 0.47
SDC2-203ENST00000519587 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
SDC2-203ENST00000519587 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
SDC2-203ENST00000519587 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
SDC2-203ENST00000519587 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
SDC2-203ENST00000519587 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
SDC2-203ENST00000519587 CHD4Q14839 1912 aa17.96■□□□□ 0.47
SDC2-203ENST00000519587 AFDNP55196 1824 aaKnown RBP17.95■□□□□ 0.46
SDC2-203ENST00000519587 ADCY9O60503 1353 aa17.95■□□□□ 0.46
SDC2-203ENST00000519587 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
SDC2-203ENST00000519587 TTLL7Q6ZT98 887 aa17.95■□□□□ 0.46
SDC2-203ENST00000519587 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
SDC2-203ENST00000519587 NARFQ9UHQ1 456 aa17.95■□□□□ 0.46
SDC2-203ENST00000519587 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
SDC2-203ENST00000519587 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 MSH5O43196 834 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 TRIM27P14373 513 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 HSP90AB3PQ58FF7 597 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 ARHGEF1Q92888 912 aaKnown RBP17.94■□□□□ 0.46
SDC2-203ENST00000519587 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
SDC2-203ENST00000519587 ATP10DQ9P241 1426 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 CAMTA2O94983 1202 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 CLEC4GQ6UXB4 293 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
SDC2-203ENST00000519587 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
SDC2-203ENST00000519587 ABCC4O15439 1325 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 RNF123Q5XPI4 1314 aa17.92■□□□□ 0.46
SDC2-203ENST00000519587 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
SDC2-203ENST00000519587 SLC4A10Q6U841 1118 aa17.91■□□□□ 0.46
SDC2-203ENST00000519587 DZIP1LQ8IYY4 767 aaKnown RBP17.91■□□□□ 0.46
SDC2-203ENST00000519587 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
SDC2-203ENST00000519587 F6X3S4 739 aa17.9■□□□□ 0.46
SDC2-203ENST00000519587 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
SDC2-203ENST00000519587 CCT4P50991 539 aaKnown RBP17.9■□□□□ 0.46
SDC2-203ENST00000519587 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
SDC2-203ENST00000519587 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
SDC2-203ENST00000519587 COL24A1Q17RW2 1714 aa17.89■□□□□ 0.46
SDC2-203ENST00000519587 PLIN1O60240 522 aa17.89■□□□□ 0.45
SDC2-203ENST00000519587 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
SDC2-203ENST00000519587 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
SDC2-203ENST00000519587 CLUAP1Q96AJ1 413 aa17.89■□□□□ 0.45
SDC2-203ENST00000519587 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SDC2-203ENST00000519587 SRP68Q9UHB9 627 aaKnown RBP17.89■□□□□ 0.45
SDC2-203ENST00000519587 PTGER2P43116 358 aa17.88■□□□□ 0.45
SDC2-203ENST00000519587 TCIRG1Q13488 830 aa17.88■□□□□ 0.45
SDC2-203ENST00000519587 MYD88Q99836 296 aa17.88■□□□□ 0.45
SDC2-203ENST00000519587 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
SDC2-203ENST00000519587 UTRNP46939 3433 aa17.88■□□□□ 0.45
SDC2-203ENST00000519587 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
SDC2-203ENST00000519587 HLFQ16534 295 aa17.87■□□□□ 0.45
SDC2-203ENST00000519587 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
SDC2-203ENST00000519587 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
SDC2-203ENST00000519587 FHDC1Q9C0D6 1143 aaPredicted RBP17.87■□□□□ 0.45
SDC2-203ENST00000519587 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
SDC2-203ENST00000519587 NEFLP07196 543 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 GYS1P13807 737 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
SDC2-203ENST00000519587 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 SYT17Q9BSW7 474 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
SDC2-203ENST00000519587 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
SDC2-203ENST00000519587 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
SDC2-203ENST00000519587 TRIM28Q13263 835 aaKnown RBP17.85■□□□□ 0.45
SDC2-203ENST00000519587 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
SDC2-203ENST00000519587 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
SDC2-203ENST00000519587 PANK1Q8TE04 598 aa17.85■□□□□ 0.45
SDC2-203ENST00000519587 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
SDC2-203ENST00000519587 ISCA1Q9BUE6 129 aa17.85■□□□□ 0.45
SDC2-203ENST00000519587 CHMP4BQ9H444 224 aaKnown RBP17.85■□□□□ 0.45
SDC2-203ENST00000519587 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms