RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NBPF10Q6P3W6 841 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
TRAPPC9-206ENST00000519482 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
TRAPPC9-206ENST00000519482 NPHP1O15259 732 aa16.42■□□□□ 0.22
TRAPPC9-206ENST00000519482 LMNB1P20700 586 aa16.42■□□□□ 0.22
TRAPPC9-206ENST00000519482 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
TRAPPC9-206ENST00000519482 NUP98P52948 1817 aa16.42■□□□□ 0.22
TRAPPC9-206ENST00000519482 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC9-206ENST00000519482 RASSF7Q02833 373 aa16.41■□□□□ 0.22
TRAPPC9-206ENST00000519482 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAPPC9-206ENST00000519482 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
TRAPPC9-206ENST00000519482 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-206ENST00000519482 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
TRAPPC9-206ENST00000519482 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
TRAPPC9-206ENST00000519482 SRGNP10124 158 aa16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 DDX10Q13206 875 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 STYK1Q6J9G0 422 aa16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-206ENST00000519482 NFKBIEO00221 500 aa16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 C16orf71Q8IYS4 520 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC9-206ENST00000519482 C21orf2O43822 256 aa16.37■□□□□ 0.21
TRAPPC9-206ENST00000519482 PRELPP51888 382 aa16.37■□□□□ 0.21
TRAPPC9-206ENST00000519482 RIPK4P57078 832 aa16.37■□□□□ 0.21
TRAPPC9-206ENST00000519482 KLRG2A4D1S0 409 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 LMOD3Q0VAK6 560 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 SOGA3Q5TF21 947 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 RRAGCQ9HB90 399 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
TRAPPC9-206ENST00000519482 GLTPD2A6NH11 291 aa16.35■□□□□ 0.21
TRAPPC9-206ENST00000519482 APLP1P51693 650 aa16.35■□□□□ 0.21
TRAPPC9-206ENST00000519482 HLFQ16534 295 aa16.35■□□□□ 0.21
TRAPPC9-206ENST00000519482 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
TRAPPC9-206ENST00000519482 NPR1P16066 1061 aa16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 FSTL1Q12841 308 aa16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
TRAPPC9-206ENST00000519482 WDR90Q96KV7 1748 aa16.33■□□□□ 0.21
TRAPPC9-206ENST00000519482 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
TRAPPC9-206ENST00000519482 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
TRAPPC9-206ENST00000519482 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
TRAPPC9-206ENST00000519482 TAOK3Q9H2K8 898 aa16.33■□□□□ 0.2
TRAPPC9-206ENST00000519482 MYL6BP14649 208 aa16.32■□□□□ 0.2
TRAPPC9-206ENST00000519482 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-206ENST00000519482 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
TRAPPC9-206ENST00000519482 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 FAM177BA6PVY3 158 aa16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
TRAPPC9-206ENST00000519482 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
TRAPPC9-206ENST00000519482 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
TRAPPC9-206ENST00000519482 RUNDC1Q96C34 613 aa16.3■□□□□ 0.2
TRAPPC9-206ENST00000519482 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
TRAPPC9-206ENST00000519482 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-206ENST00000519482 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
TRAPPC9-206ENST00000519482 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
TRAPPC9-206ENST00000519482 ANP32CO43423 234 aa16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 PDIA6Q15084 440 aa16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 PRKRIP1Q9H875 184 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-206ENST00000519482 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 CCER2I3L3R5 266 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
TRAPPC9-206ENST00000519482 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 SCN4AP35499 1836 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 CHL1O00533 1208 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 GPTP24298 496 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 PARP10Q53GL7 1025 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
TRAPPC9-206ENST00000519482 POTECB2RU33 542 aa16.25■□□□□ 0.19
TRAPPC9-206ENST00000519482 HOXA10P31260 410 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC9-206ENST00000519482 SUSD4Q5VX71 490 aa16.25■□□□□ 0.19
TRAPPC9-206ENST00000519482 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms