RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 NEMFO60524 1076 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 PNMA6AP0CW24 399 aaPredicted RBP13.51□□□□□ -0.25
SPIDR-211ENST00000519401 CALRP27797 417 aaKnown RBP13.51□□□□□ -0.25
SPIDR-211ENST00000519401 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 AK7Q96M32 723 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 SBNO2Q9Y2G9 1366 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
SPIDR-211ENST00000519401 CUL4AQ13619 759 aa13.51□□□□□ -0.25
SPIDR-211ENST00000519401 TACO1Q9BSH4 297 aaKnown RBP13.51□□□□□ -0.25
SPIDR-211ENST00000519401 CCDC196A0A1B0GTZ2 297 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPIDR-211ENST00000519401 CPP00450 1065 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 GYS2P54840 703 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 NEK11Q8NG66 645 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 PPM1EQ8WY54 764 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 EXOC4Q96A65 974 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 RUNDC1Q96C34 613 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 TMX1Q9H3N1 280 aa13.5□□□□□ -0.25
SPIDR-211ENST00000519401 AHDC1Q5TGY3 1603 aaPredicted RBP13.5□□□□□ -0.25
SPIDR-211ENST00000519401 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ELF2Q15723 593 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ATF7IPQ6VMQ6 1270 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-211ENST00000519401 PHLPP1O60346 1717 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
SPIDR-211ENST00000519401 TUBB4AP04350 444 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 PTGS1P23219 599 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 TDO2P48775 406 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
SPIDR-211ENST00000519401 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 LCMT1Q9UIC8 334 aa13.49□□□□□ -0.25
SPIDR-211ENST00000519401 KIF3CO14782 793 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 RPS6KA5O75582 802 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 TRIM27P14373 513 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 UBE2HP62256 183 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 MAP2K1Q02750 393 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-211ENST00000519401 SUFUQ9UMX1 484 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 ERBB3P21860 1342 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 AP5Z1O43299 807 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
SPIDR-211ENST00000519401 DRC1Q96MC2 740 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
SPIDR-211ENST00000519401 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 USP32Q8NFA0 1604 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 AATKQ6ZMQ8 1374 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
SPIDR-211ENST00000519401 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
SPIDR-211ENST00000519401 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 USP48Q86UV5 1035 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 L2HGDHQ9H9P8 463 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 ADGRB2O60241 1585 aa13.47□□□□□ -0.25
SPIDR-211ENST00000519401 CCDC189A1A4V9 331 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.25
SPIDR-211ENST00000519401 CDC25BP30305 580 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 MMS22LQ6ZRQ5 1243 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
SPIDR-211ENST00000519401 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 SMARCE1Q969G3 411 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.25
SPIDR-211ENST00000519401 ACTN2P35609 894 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 CLCN6P51797 869 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 PTPN14Q15678 1187 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 TICAM2Q86XR7 235 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 FAM200AQ8TCP9 573 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 TOMM22Q9NS69 142 aa13.46□□□□□ -0.26
SPIDR-211ENST00000519401 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.26
SPIDR-211ENST00000519401 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
SPIDR-211ENST00000519401 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-211ENST00000519401 CCDC192P0DO97 292 aa13.45□□□□□ -0.26
SPIDR-211ENST00000519401 ESCO1Q5FWF5 840 aa13.45□□□□□ -0.26
SPIDR-211ENST00000519401 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
SPIDR-211ENST00000519401 SPC24Q8NBT2 197 aa13.45□□□□□ -0.26
SPIDR-211ENST00000519401 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
SPIDR-211ENST00000519401 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-211ENST00000519401 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
SPIDR-211ENST00000519401 GOLIM4O00461 696 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 TPM1P09493 284 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 MAP2K2P36507 400 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 ANKRD20A12PQ8NF67 263 aa13.44□□□□□ -0.26
SPIDR-211ENST00000519401 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
SPIDR-211ENST00000519401 TMX3Q96JJ7 454 aa13.43□□□□□ -0.26
SPIDR-211ENST00000519401 JCADQ9P266 1359 aa13.43□□□□□ -0.26
SPIDR-211ENST00000519401 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
SPIDR-211ENST00000519401 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms