RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CFAP44	Q96MT7	982 aa		31.51	■■■□□ 2.63
CNOT7-204	ENST00000518885	MRS2	Q9HD23	443 aa		31.51	■■■□□ 2.63
CNOT7-204	ENST00000518885	PRR5L	Q6MZQ0	368 aa		31.5	■■■□□ 2.63
CNOT7-204	ENST00000518885	NBPF5P	Q86XG9	351 aa	Predicted RBP	31.5	■■■□□ 2.63
CNOT7-204	ENST00000518885	C2CD5	Q86YS7	1000 aa		31.5	■■■□□ 2.63
CNOT7-204	ENST00000518885	NGEF	Q8N5V2	710 aa		31.5	■■■□□ 2.63
CNOT7-204	ENST00000518885	BRCA1	P38398	1863 aa	Known RBP	31.49	■■■□□ 2.63
CNOT7-204	ENST00000518885	EIF2S2	P20042	333 aa	Known RBP	31.49	■■■□□ 2.63
CNOT7-204	ENST00000518885	ARHGAP27	Q6ZUM4	889 aa		31.49	■■■□□ 2.63
CNOT7-204	ENST00000518885	NIP7	Q9Y221	180 aa	Known RBP eCLIP	31.49	■■■□□ 2.63
CNOT7-204	ENST00000518885	MAP3K15	Q6ZN16	1313 aa		31.48	■■■□□ 2.63
CNOT7-204	ENST00000518885	HOXB7	P09629	217 aa		31.47	■■■□□ 2.63
CNOT7-204	ENST00000518885	TPTE2	Q6XPS3	522 aa		31.47	■■■□□ 2.63
CNOT7-204	ENST00000518885	TTLL6	Q8N841	843 aa		31.46	■■■□□ 2.63
CNOT7-204	ENST00000518885	ARFGEF1	Q9Y6D6	1849 aa		31.45	■■■□□ 2.63
CNOT7-204	ENST00000518885	GNAI1	P63096	354 aa		31.45	■■■□□ 2.63
CNOT7-204	ENST00000518885	IFT57	Q9NWB7	429 aa		31.45	■■■□□ 2.63
CNOT7-204	ENST00000518885	NYX	Q9GZU5	481 aa		31.43	■■■□□ 2.62
CNOT7-204	ENST00000518885	GTF2E1	P29083	439 aa	Predicted RBP	31.42	■■■□□ 2.62
CNOT7-204	ENST00000518885	CHMP4A	Q9BY43	222 aa		31.42	■■■□□ 2.62
CNOT7-204	ENST00000518885	DLEC1	Q9Y238	1755 aa		31.42	■■■□□ 2.62
CNOT7-204	ENST00000518885	HLF	Q16534	295 aa		31.41	■■■□□ 2.62
CNOT7-204	ENST00000518885	CCDC184	Q52MB2	194 aa		31.41	■■■□□ 2.62
CNOT7-204	ENST00000518885	ATP10D	Q9P241	1426 aa		31.41	■■■□□ 2.62
CNOT7-204	ENST00000518885	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.4	■■■□□ 2.62
CNOT7-204	ENST00000518885	TTLL7	Q6ZT98	887 aa		31.39	■■■□□ 2.62
CNOT7-204	ENST00000518885	ZBTB3	Q9H5J0	574 aa		31.39	■■■□□ 2.62
CNOT7-204	ENST00000518885	ADCY9	O60503	1353 aa		31.39	■■■□□ 2.62
CNOT7-204	ENST00000518885	NCBP3	Q53F19	620 aa	Known RBP	31.38	■■■□□ 2.61
CNOT7-204	ENST00000518885	HDGFL1	Q5TGJ6	251 aa		31.38	■■■□□ 2.61
CNOT7-204	ENST00000518885	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.38	■■■□□ 2.61
CNOT7-204	ENST00000518885	MBIP	Q9NS73	344 aa		31.38	■■■□□ 2.61
CNOT7-204	ENST00000518885	ZNF853	P0CG23	659 aa		31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	PDIA6	Q15084	440 aa		31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	CCDC27	Q2M243	656 aa		31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	STYK1	Q6J9G0	422 aa		31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	GIGYF2	Q6Y7W6	1299 aa	Known RBP	31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	CNKSR1	Q969H4	720 aa		31.37	■■■□□ 2.61
CNOT7-204	ENST00000518885	CCDC24	Q8N4L8	307 aa		31.36	■■■□□ 2.61
CNOT7-204	ENST00000518885	HSP90AB3P	Q58FF7	597 aa		31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	NECTIN2	Q92692	538 aa		31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	MASTL	Q96GX5	879 aa		31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	DBF4	Q9UBU7	674 aa	Predicted RBP	31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	ANKRD31	Q8N7Z5	1873 aa		31.35	■■■□□ 2.61
CNOT7-204	ENST00000518885	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.34	■■■□□ 2.61
CNOT7-204	ENST00000518885	FAM177B	A6PVY3	158 aa		31.34	■■■□□ 2.61
CNOT7-204	ENST00000518885	PARP10	Q53GL7	1025 aa		31.34	■■■□□ 2.61
CNOT7-204	ENST00000518885	SRGN	P10124	158 aa		31.33	■■■□□ 2.61
CNOT7-204	ENST00000518885	KRT24	Q2M2I5	525 aa		31.33	■■■□□ 2.61
CNOT7-204	ENST00000518885	DUSP27	Q5VZP5	1158 aa		31.33	■■■□□ 2.61
CNOT7-204	ENST00000518885	PPP1R42	Q7Z4L9	355 aa		31.33	■■■□□ 2.61
CNOT7-204	ENST00000518885	SOGA3	Q5TF21	947 aa		31.32	■■■□□ 2.6
CNOT7-204	ENST00000518885	LRP10	Q7Z4F1	713 aa		31.32	■■■□□ 2.6
CNOT7-204	ENST00000518885	NUP98	P52948	1817 aa		31.31	■■■□□ 2.6
CNOT7-204	ENST00000518885	NPR1	P16066	1061 aa		31.31	■■■□□ 2.6
CNOT7-204	ENST00000518885	COPS6	Q7L5N1	327 aa		31.31	■■■□□ 2.6
CNOT7-204	ENST00000518885	HYPK	Q9NX55	129 aa		31.31	■■■□□ 2.6
CNOT7-204	ENST00000518885	CHPF2	Q9P2E5	772 aa		31.31	■■■□□ 2.6
CNOT7-204	ENST00000518885	GPT	P24298	496 aa		31.3	■■■□□ 2.6
CNOT7-204	ENST00000518885	AIMP1	Q12904	312 aa	Known RBP	31.3	■■■□□ 2.6
CNOT7-204	ENST00000518885	PROSER3	Q2NL68	480 aa		31.3	■■■□□ 2.6
CNOT7-204	ENST00000518885	XAGE3	Q8WTP9	111 aa		31.3	■■■□□ 2.6
CNOT7-204	ENST00000518885	ANXA1	P04083	346 aa		31.29	■■■□□ 2.6
CNOT7-204	ENST00000518885	C9orf131	Q5VYM1	1079 aa		31.29	■■■□□ 2.6
CNOT7-204	ENST00000518885	ZNF34	Q8IZ26	560 aa		31.29	■■■□□ 2.6
CNOT7-204	ENST00000518885	KLRG2	A4D1S0	409 aa	Predicted RBP	31.28	■■■□□ 2.6
CNOT7-204	ENST00000518885	COL11A2	P13942	1736 aa	Predicted RBP	31.28	■■■□□ 2.6
CNOT7-204	ENST00000518885	RNF123	Q5XPI4	1314 aa		31.27	■■■□□ 2.6
CNOT7-204	ENST00000518885	WWC1	Q8IX03	1113 aa		31.27	■■■□□ 2.6
CNOT7-204	ENST00000518885	RNF181	Q9P0P0	153 aa		31.27	■■■□□ 2.6
CNOT7-204	ENST00000518885	IL16	Q14005	1332 aa		31.26	■■■□□ 2.6
CNOT7-204	ENST00000518885	ZNF526	Q8TF50	670 aa	Predicted RBP	31.26	■■■□□ 2.59
CNOT7-204	ENST00000518885	UBN2	Q6ZU65	1347 aa		31.25	■■■□□ 2.59
CNOT7-204	ENST00000518885	RIC1	Q4ADV7	1423 aa		31.25	■■■□□ 2.59
CNOT7-204	ENST00000518885	LMNB1	P20700	586 aa		31.25	■■■□□ 2.59
CNOT7-204	ENST00000518885	ALDH1B1	P30837	517 aa		31.25	■■■□□ 2.59
CNOT7-204	ENST00000518885	PRPF40B	Q6NWY9	871 aa	Known RBP	31.25	■■■□□ 2.59
CNOT7-204	ENST00000518885	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.24	■■■□□ 2.59
CNOT7-204	ENST00000518885	C21orf2	O43822	256 aa		31.24	■■■□□ 2.59
CNOT7-204	ENST00000518885	SUSD4	Q5VX71	490 aa		31.24	■■■□□ 2.59
CNOT7-204	ENST00000518885	UTP14A	Q9BVJ6	771 aa	Known RBP	31.24	■■■□□ 2.59
CNOT7-204	ENST00000518885	ERFE	Q4G0M1	354 aa		31.23	■■■□□ 2.59
CNOT7-204	ENST00000518885	NUTM1	Q86Y26	1132 aa		31.23	■■■□□ 2.59
CNOT7-204	ENST00000518885	PLBD2	Q8NHP8	589 aa		31.23	■■■□□ 2.59
CNOT7-204	ENST00000518885	CCDC30	Q5VVM6	783 aa		31.22	■■■□□ 2.59
CNOT7-204	ENST00000518885	ANKRD13D	Q6ZTN6	518 aa		31.22	■■■□□ 2.59
CNOT7-204	ENST00000518885	FAM9B	Q8IZU0	186 aa		31.22	■■■□□ 2.59
CNOT7-204	ENST00000518885	NTSR2	O95665	410 aa		31.21	■■■□□ 2.59
CNOT7-204	ENST00000518885	TCIRG1	Q13488	830 aa		31.21	■■■□□ 2.59
CNOT7-204	ENST00000518885	RPGR	Q92834	1020 aa	Known RBP	31.21	■■■□□ 2.59
CNOT7-204	ENST00000518885	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.21	■■■□□ 2.59
CNOT7-204	ENST00000518885	ELL2	O00472	640 aa	Predicted RBP	31.2	■■■□□ 2.59
CNOT7-204	ENST00000518885	GOLGA2	Q08379	1002 aa		31.2	■■■□□ 2.59
CNOT7-204	ENST00000518885	KDM2B	Q8NHM5	1336 aa		31.2	■■■□□ 2.58
CNOT7-204	ENST00000518885	ARFGEF2	Q9Y6D5	1785 aa		31.2	■■■□□ 2.58
CNOT7-204	ENST00000518885	C1QTNF8	P60827	252 aa		31.19	■■■□□ 2.58
CNOT7-204	ENST00000518885	RASSF7	Q02833	373 aa		31.19	■■■□□ 2.58
CNOT7-204	ENST00000518885	CRY2	Q49AN0	593 aa		31.19	■■■□□ 2.58
CNOT7-204	ENST00000518885	WDR63	Q8IWG1	891 aa		31.19	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms