RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 SLIT3O75094 1523 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 ADGRL3Q9HAR2 1447 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 TEFQ10587 303 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 SASH1O94885 1247 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 HYPKQ9NX55 129 aa10.23□□□□□ -0.77
CTNNA1-210ENST00000518825 TTC41PQ6P2S7 1318 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 KCNH5Q8NCM2 988 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 RGPD5Q99666 1765 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 KSR2Q6VAB6 950 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 SUCLG2Q96I99 432 aa10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 NOL7Q9UMY1 257 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-210ENST00000518825 MBD3O95983 291 aa10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 PLEKHO1Q53GL0 409 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 ANKRD24Q8TF21 1146 aa10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 KCNB2Q92953 911 aa10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 CNPY2Q9Y2B0 182 aa10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 SYT1P21579 422 aa10.21□□□□□ -0.77
CTNNA1-210ENST00000518825 TRPM3Q9HCF6 1732 aaPredicted RBP10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 UTYO14607 1347 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 GLRX3O76003 335 aaKnown RBP10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 IGKV5-2P06315 115 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 NECTIN1Q15223 517 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 TMEM87AQ8NBN3 555 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 EAF2Q96CJ1 260 aaPredicted RBP10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 C5P01031 1676 aa10.21□□□□□ -0.78
CTNNA1-210ENST00000518825 WDR33Q9C0J8 1336 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 OVOS2A0A0G2JMS6 1433 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 AMOTQ4VCS5 1084 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 HS1BP3Q53T59 392 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 BICC1Q9H694 974 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 ECHDC1Q9NTX5 307 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 ALDH1L1O75891 902 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 KLHDC4Q8TBB5 520 aa10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 PRPF40BQ6NWY9 871 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 C9orf78Q9NZ63 289 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-210ENST00000518825 OFD1O75665 1012 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 HSP90AB4PQ58FF6 505 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 CLASRPQ8N2M8 674 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 SLC39A6Q13433 755 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 EPHA10Q5JZY3 1008 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 ANP32BQ92688 251 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 GRM8O00222 908 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 STX6O43752 255 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 AACSQ86V21 672 aa10.19□□□□□ -0.78
CTNNA1-210ENST00000518825 KDM6AO15550 1401 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 ZNF500O60304 480 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 AIMP1Q12904 312 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 ME3Q16798 604 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 C1orf141Q5JVX7 400 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 LRP10Q7Z4F1 713 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 CCDC83Q8IWF9 413 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 LINS1Q8NG48 757 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 CCDC8Q9H0W5 538 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 KIAA1211Q6ZU35 1233 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 JAKMIP1Q96N16 626 aaKnown RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 DIAPH3Q9NSV4 1193 aa10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 NPHP4O75161 1426 aaPredicted RBP10.18□□□□□ -0.78
CTNNA1-210ENST00000518825 A0A0D9SFI3 127 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 F13A1P00488 732 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 TSPY26PQ9H489 355 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 DDX21Q9NR30 783 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 TPCN1Q9ULQ1 816 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 MTMR6Q9Y217 621 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 CCDC171Q6TFL3 1326 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 COL15A1P39059 1388 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 CHGBP05060 677 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 NMIQ13287 307 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 MAP4K1Q92918 833 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 MRC1P22897 1456 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 LMTK3Q96Q04 1460 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 IFIT2P09913 472 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 GJB2P29033 226 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 EVI5LQ96CN4 794 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 SIL1Q9H173 461 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 PDRG1Q9NUG6 133 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 RBM8AQ9Y5S9 174 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 ERBB3P21860 1342 aa10.17□□□□□ -0.78
CTNNA1-210ENST00000518825 MSNP26038 577 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-210ENST00000518825 CREB3L3Q68CJ9 461 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms