RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 CHD4Q14839 1912 aa13.15□□□□□ -0.3
TTC1-202ENST00000518560 YY1P25490 414 aa13.15□□□□□ -0.3
TTC1-202ENST00000518560 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
TTC1-202ENST00000518560 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
TTC1-202ENST00000518560 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
TTC1-202ENST00000518560 PHF14O94880 888 aa13.14□□□□□ -0.31
TTC1-202ENST00000518560 ITPK1Q13572 414 aa13.14□□□□□ -0.31
TTC1-202ENST00000518560 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
TTC1-202ENST00000518560 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
TTC1-202ENST00000518560 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
TTC1-202ENST00000518560 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
TTC1-202ENST00000518560 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
TTC1-202ENST00000518560 TJP1Q07157 1748 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 KDRP35968 1356 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
TTC1-202ENST00000518560 IL13P35225 146 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 NLGN2Q8NFZ4 835 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
TTC1-202ENST00000518560 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
TTC1-202ENST00000518560 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
TTC1-202ENST00000518560 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
TTC1-202ENST00000518560 POLD1P28340 1107 aa13.12□□□□□ -0.31
TTC1-202ENST00000518560 SIK1P57059 783 aa13.12□□□□□ -0.31
TTC1-202ENST00000518560 AK7Q96M32 723 aa13.12□□□□□ -0.31
TTC1-202ENST00000518560 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
TTC1-202ENST00000518560 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
TTC1-202ENST00000518560 MTHFSP49914 203 aa13.11□□□□□ -0.31
TTC1-202ENST00000518560 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
TTC1-202ENST00000518560 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
TTC1-202ENST00000518560 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
TTC1-202ENST00000518560 PLEKHG2Q9H7P9 1386 aa13.1□□□□□ -0.31
TTC1-202ENST00000518560 HMOX1P09601 288 aa13.1□□□□□ -0.31
TTC1-202ENST00000518560 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
TTC1-202ENST00000518560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
TTC1-202ENST00000518560 EVI5O60447 810 aa13.09□□□□□ -0.31
TTC1-202ENST00000518560 PDE4AP27815 886 aa13.09□□□□□ -0.31
TTC1-202ENST00000518560 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.31
TTC1-202ENST00000518560 GNPATO15228 680 aa13.08□□□□□ -0.32
TTC1-202ENST00000518560 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
TTC1-202ENST00000518560 ANKK1Q8NFD2 765 aa13.08□□□□□ -0.32
TTC1-202ENST00000518560 DCAF5Q96JK2 942 aa13.08□□□□□ -0.32
TTC1-202ENST00000518560 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
TTC1-202ENST00000518560 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
TTC1-202ENST00000518560 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
TTC1-202ENST00000518560 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
TTC1-202ENST00000518560 MRC1P22897 1456 aa13.06□□□□□ -0.32
TTC1-202ENST00000518560 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
TTC1-202ENST00000518560 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
TTC1-202ENST00000518560 CABP4P57796 275 aa13.06□□□□□ -0.32
TTC1-202ENST00000518560 GPR162Q16538 588 aa13.06□□□□□ -0.32
TTC1-202ENST00000518560 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
TTC1-202ENST00000518560 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
TTC1-202ENST00000518560 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
TTC1-202ENST00000518560 SSFA2P28290 1259 aa13.05□□□□□ -0.32
TTC1-202ENST00000518560 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
TTC1-202ENST00000518560 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
TTC1-202ENST00000518560 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
TTC1-202ENST00000518560 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
TTC1-202ENST00000518560 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
TTC1-202ENST00000518560 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
TTC1-202ENST00000518560 KIF13BQ9NQT8 1826 aa13.04□□□□□ -0.32
TTC1-202ENST00000518560 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
TTC1-202ENST00000518560 Q6ZNB5 142 aa13.04□□□□□ -0.32
TTC1-202ENST00000518560 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
TTC1-202ENST00000518560 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
TTC1-202ENST00000518560 MAP3K9P80192 1104 aa13.03□□□□□ -0.32
TTC1-202ENST00000518560 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
TTC1-202ENST00000518560 RABGEF1Q9UJ41 708 aa13.03□□□□□ -0.32
TTC1-202ENST00000518560 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
TTC1-202ENST00000518560 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
TTC1-202ENST00000518560 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
TTC1-202ENST00000518560 PPP1R3GB7ZBB8 358 aa13.01□□□□□ -0.33
TTC1-202ENST00000518560 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
TTC1-202ENST00000518560 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
TTC1-202ENST00000518560 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
TTC1-202ENST00000518560 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
TTC1-202ENST00000518560 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
TTC1-202ENST00000518560 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
TTC1-202ENST00000518560 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
TTC1-202ENST00000518560 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
TTC1-202ENST00000518560 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
TTC1-202ENST00000518560 MMP10P09238 476 aa12.99□□□□□ -0.33
TTC1-202ENST00000518560 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
TTC1-202ENST00000518560 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
TTC1-202ENST00000518560 CD2APQ9Y5K6 639 aa12.99□□□□□ -0.33
TTC1-202ENST00000518560 UTRNP46939 3433 aa12.98□□□□□ -0.33
TTC1-202ENST00000518560 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
TTC1-202ENST00000518560 HMGB2P26583 209 aaKnown RBP12.98□□□□□ -0.33
TTC1-202ENST00000518560 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
TTC1-202ENST00000518560 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
TTC1-202ENST00000518560 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
TTC1-202ENST00000518560 DLG5Q8TDM6 1919 aa12.98□□□□□ -0.33
TTC1-202ENST00000518560 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
TTC1-202ENST00000518560 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
TTC1-202ENST00000518560 GYS1P13807 737 aa12.97□□□□□ -0.33
TTC1-202ENST00000518560 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
TTC1-202ENST00000518560 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms