RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-203ENST00000518151 EFSO43281 561 aa9.43□□□□□ -0.9
CSMD1-203ENST00000518151 SNRPNP63162 240 aaKnown RBP9.43□□□□□ -0.9
CSMD1-203ENST00000518151 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
CSMD1-203ENST00000518151 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-203ENST00000518151 ZNF468Q5VIY5 522 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-203ENST00000518151 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
CSMD1-203ENST00000518151 LRRC69Q6ZNQ3 347 aa9.42□□□□□ -0.9
CSMD1-203ENST00000518151 BTBD6Q96KE9 485 aa9.42□□□□□ -0.9
CSMD1-203ENST00000518151 ANKIB1Q9P2G1 1089 aa9.42□□□□□ -0.9
CSMD1-203ENST00000518151 SEC13P55735 322 aa9.41□□□□□ -0.9
CSMD1-203ENST00000518151 TSEN2Q8NCE0 465 aaKnown RBP9.41□□□□□ -0.9
CSMD1-203ENST00000518151 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
CSMD1-203ENST00000518151 GNB5O14775 395 aa9.4□□□□□ -0.9
CSMD1-203ENST00000518151 PPP1R12BO60237 982 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-203ENST00000518151 PLA2G4EQ3MJ16 856 aa9.4□□□□□ -0.9
CSMD1-203ENST00000518151 POTEAQ6S8J7 498 aa9.4□□□□□ -0.9
CSMD1-203ENST00000518151 PPP1R12CQ9BZL4 782 aa9.4□□□□□ -0.9
CSMD1-203ENST00000518151 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
CSMD1-203ENST00000518151 HIF1AQ16665 826 aa9.39□□□□□ -0.91
CSMD1-203ENST00000518151 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
CSMD1-203ENST00000518151 NOP53Q9NZM5 478 aaKnown RBP9.39□□□□□ -0.91
CSMD1-203ENST00000518151 MSTNO14793 375 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 DKK1O94907 266 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 NEUROD1Q13562 356 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 C7orf43Q8WVR3 580 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
CSMD1-203ENST00000518151 ALAS2P22557 587 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 DGKGP49619 791 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
CSMD1-203ENST00000518151 LINC00114Q6XXX2 140 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 STRN4Q9NRL3 753 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
CSMD1-203ENST00000518151 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
CSMD1-203ENST00000518151 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
CSMD1-203ENST00000518151 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
CSMD1-203ENST00000518151 SIN3BO75182 1162 aa9.35□□□□□ -0.91
CSMD1-203ENST00000518151 HOXB4P17483 251 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-203ENST00000518151 SYT9Q86SS6 491 aa9.35□□□□□ -0.91
CSMD1-203ENST00000518151 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
CSMD1-203ENST00000518151 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
CSMD1-203ENST00000518151 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
CSMD1-203ENST00000518151 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-203ENST00000518151 ELOA3DA6NLF2 546 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-203ENST00000518151 C21orf2O43822 256 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 PTK7Q13308 1070 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 GRIN2CQ14957 1233 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 ELOA3BQ3SY89 546 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 KANK4Q5T7N3 995 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-203ENST00000518151 ALDH16A1Q8IZ83 802 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 ELOA3Q8NG57 546 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 SPOCK3Q9BQ16 436 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 HINFPQ9BQA5 517 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-203ENST00000518151 BRD7Q9NPI1 651 aa9.34□□□□□ -0.91
CSMD1-203ENST00000518151 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L21D6R901 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-203ENST00000518151 KCNQ4P56696 695 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 SUZ12Q15022 739 aaKnown RBP9.33□□□□□ -0.92
CSMD1-203ENST00000518151 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-203ENST00000518151 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-203ENST00000518151 SUSD3Q96L08 255 aa9.33□□□□□ -0.92
CSMD1-203ENST00000518151 COL8A1P27658 744 aa9.32□□□□□ -0.92
CSMD1-203ENST00000518151 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
CSMD1-203ENST00000518151 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
CSMD1-203ENST00000518151 DPYDQ12882 1025 aa9.32□□□□□ -0.92
CSMD1-203ENST00000518151 ANKMY2Q8IV38 441 aa9.32□□□□□ -0.92
CSMD1-203ENST00000518151 HSH2DQ96JZ2 352 aa9.32□□□□□ -0.92
CSMD1-203ENST00000518151 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
CSMD1-203ENST00000518151 ADARB2-AS1A8MUL3 147 aa9.31□□□□□ -0.92
CSMD1-203ENST00000518151 IGFBP4P22692 258 aa9.31□□□□□ -0.92
CSMD1-203ENST00000518151 TYRO3Q06418 890 aa9.31□□□□□ -0.92
CSMD1-203ENST00000518151 KCNH4Q9UQ05 1017 aa9.31□□□□□ -0.92
CSMD1-203ENST00000518151 RTN1Q16799 776 aa9.3□□□□□ -0.92
CSMD1-203ENST00000518151 TNFRSF25Q93038 417 aa9.3□□□□□ -0.92
CSMD1-203ENST00000518151 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
CSMD1-203ENST00000518151 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
CSMD1-203ENST00000518151 EFCC1Q9HA90 598 aa9.3□□□□□ -0.92
CSMD1-203ENST00000518151 SPDYE3A6NKU9 549 aa9.29□□□□□ -0.92
CSMD1-203ENST00000518151 ITGB2P05107 769 aa9.29□□□□□ -0.92
CSMD1-203ENST00000518151 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
CSMD1-203ENST00000518151 SLC30A3Q99726 388 aa9.29□□□□□ -0.92
CSMD1-203ENST00000518151 PROCP04070 461 aa9.28□□□□□ -0.92
CSMD1-203ENST00000518151 IER5Q5VY09 327 aa9.28□□□□□ -0.92
CSMD1-203ENST00000518151 BTLAQ7Z6A9 289 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms