RNA–Protein interactions for RNA: ENST00000518052.1

COL13A1-211, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 290 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-211ENST00000518052 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
COL13A1-211ENST00000518052 ST5P78524 1137 aa16.1■□□□□ 0.17
COL13A1-211ENST00000518052 HTRA3P83110 453 aa16.1■□□□□ 0.17
COL13A1-211ENST00000518052 NIP7Q9Y221 180 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL13A1-211ENST00000518052 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
COL13A1-211ENST00000518052 CCDC88AQ3V6T2 1871 aa16.1■□□□□ 0.17
COL13A1-211ENST00000518052 MYL6BP14649 208 aa16.09■□□□□ 0.17
COL13A1-211ENST00000518052 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
COL13A1-211ENST00000518052 KDM2BQ8NHM5 1336 aa16.09■□□□□ 0.17
COL13A1-211ENST00000518052 SLX4Q8IY92 1834 aa16.08■□□□□ 0.17
COL13A1-211ENST00000518052 SRGNP10124 158 aa16.08■□□□□ 0.16
COL13A1-211ENST00000518052 OLFM4Q6UX06 510 aa16.08■□□□□ 0.16
COL13A1-211ENST00000518052 TTLL7Q6ZT98 887 aa16.08■□□□□ 0.16
COL13A1-211ENST00000518052 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-211ENST00000518052 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
COL13A1-211ENST00000518052 CACNA1SQ13698 1873 aa16.08■□□□□ 0.16
COL13A1-211ENST00000518052 RIPK4P57078 832 aa16.07■□□□□ 0.16
COL13A1-211ENST00000518052 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
COL13A1-211ENST00000518052 CLEC4GQ6UXB4 293 aa16.07■□□□□ 0.16
COL13A1-211ENST00000518052 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
COL13A1-211ENST00000518052 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
COL13A1-211ENST00000518052 RALBP1Q15311 655 aa16.06■□□□□ 0.16
COL13A1-211ENST00000518052 NEUROD2Q15784 382 aa16.06■□□□□ 0.16
COL13A1-211ENST00000518052 STYK1Q6J9G0 422 aa16.06■□□□□ 0.16
COL13A1-211ENST00000518052 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
COL13A1-211ENST00000518052 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
COL13A1-211ENST00000518052 GLTPD2A6NH11 291 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 GPTP24298 496 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 NUTM1Q86Y26 1132 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 CNKSR1Q969H4 720 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 ZBTB3Q9H5J0 574 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
COL13A1-211ENST00000518052 ANXA1P04083 346 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
COL13A1-211ENST00000518052 APLP1P51693 650 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 TPTE2Q6XPS3 522 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 PNNQ9H307 717 aaKnown RBP16.04■□□□□ 0.16
COL13A1-211ENST00000518052 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 LAMB4A4D0S4 1761 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
COL13A1-211ENST00000518052 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
COL13A1-211ENST00000518052 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
COL13A1-211ENST00000518052 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
COL13A1-211ENST00000518052 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
COL13A1-211ENST00000518052 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
COL13A1-211ENST00000518052 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
COL13A1-211ENST00000518052 FER1L6Q2WGJ9 1857 aa16.02■□□□□ 0.16
COL13A1-211ENST00000518052 POTECB2RU33 542 aa16.02■□□□□ 0.16
COL13A1-211ENST00000518052 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
COL13A1-211ENST00000518052 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
COL13A1-211ENST00000518052 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.16
COL13A1-211ENST00000518052 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
COL13A1-211ENST00000518052 MYBBP1AQ9BQG0 1328 aaKnown RBP16.01■□□□□ 0.15
COL13A1-211ENST00000518052 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-211ENST00000518052 NPR1P16066 1061 aa16.01■□□□□ 0.15
COL13A1-211ENST00000518052 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
COL13A1-211ENST00000518052 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
COL13A1-211ENST00000518052 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
COL13A1-211ENST00000518052 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
COL13A1-211ENST00000518052 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
COL13A1-211ENST00000518052 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
COL13A1-211ENST00000518052 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
COL13A1-211ENST00000518052 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
COL13A1-211ENST00000518052 PDIA6Q15084 440 aa16■□□□□ 0.15
COL13A1-211ENST00000518052 SUSD4Q5VX71 490 aa16■□□□□ 0.15
COL13A1-211ENST00000518052 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
COL13A1-211ENST00000518052 NUP98P52948 1817 aa16■□□□□ 0.15
COL13A1-211ENST00000518052 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
COL13A1-211ENST00000518052 FSTL1Q12841 308 aa15.99■□□□□ 0.15
COL13A1-211ENST00000518052 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
COL13A1-211ENST00000518052 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
COL13A1-211ENST00000518052 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
COL13A1-211ENST00000518052 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
COL13A1-211ENST00000518052 LRP10Q7Z4F1 713 aa15.98■□□□□ 0.15
COL13A1-211ENST00000518052 SMC1BQ8NDV3 1235 aa15.98■□□□□ 0.15
COL13A1-211ENST00000518052 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
COL13A1-211ENST00000518052 LTBP3Q9NS15 1303 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 RGL2O15211 777 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 POTEIP0CG38 1075 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 POTEJP0CG39 1038 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
COL13A1-211ENST00000518052 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL13A1-211ENST00000518052 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 ZNF34Q8IZ26 560 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 DICER1Q9UPY3 1922 aaKnown RBP15.97■□□□□ 0.15
COL13A1-211ENST00000518052 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 WDR90Q96KV7 1748 aa15.97■□□□□ 0.15
COL13A1-211ENST00000518052 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
COL13A1-211ENST00000518052 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
COL13A1-211ENST00000518052 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
COL13A1-211ENST00000518052 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL13A1-211ENST00000518052 GIGYF2Q6Y7W6 1299 aaKnown RBP15.95■□□□□ 0.14
COL13A1-211ENST00000518052 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
COL13A1-211ENST00000518052 SYNE4Q8N205 404 aa15.95■□□□□ 0.14
COL13A1-211ENST00000518052 ZNF541Q9H0D2 1346 aa15.94■□□□□ 0.14
COL13A1-211ENST00000518052 NTSR2O95665 410 aa15.94■□□□□ 0.14
COL13A1-211ENST00000518052 ALDH1B1P30837 517 aa15.94■□□□□ 0.14
COL13A1-211ENST00000518052 LMOD3Q0VAK6 560 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms