RNA–Protein interactions for RNA: ENST00000518038.1

VPS37A-203, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-203ENST00000518038 MYL6BP14649 208 aa23.61■■□□□ 1.37
VPS37A-203ENST00000518038 TTLL7Q6ZT98 887 aa23.61■■□□□ 1.37
VPS37A-203ENST00000518038 NBPF5PQ86XG9 351 aaPredicted RBP23.61■■□□□ 1.37
VPS37A-203ENST00000518038 PRKRIP1Q9H875 184 aaPredicted RBP23.61■■□□□ 1.37
VPS37A-203ENST00000518038 NIP7Q9Y221 180 aaKnown RBP eCLIP23.61■■□□□ 1.37
VPS37A-203ENST00000518038 KDM3BQ7LBC6 1761 aa23.6■■□□□ 1.37
VPS37A-203ENST00000518038 ZNF652Q9Y2D9 606 aa23.6■■□□□ 1.37
VPS37A-203ENST00000518038 ANKRD31Q8N7Z5 1873 aa23.6■■□□□ 1.37
VPS37A-203ENST00000518038 C21orf2O43822 256 aa23.59■■□□□ 1.37
VPS37A-203ENST00000518038 ST5P78524 1137 aa23.59■■□□□ 1.37
VPS37A-203ENST00000518038 BCORQ6W2J9 1755 aa23.58■■□□□ 1.37
VPS37A-203ENST00000518038 NFKBIEO00221 500 aa23.58■■□□□ 1.37
VPS37A-203ENST00000518038 SRGNP10124 158 aa23.58■■□□□ 1.37
VPS37A-203ENST00000518038 RUNDC1Q96C34 613 aa23.58■■□□□ 1.37
VPS37A-203ENST00000518038 TRIM35Q9UPQ4 493 aa23.58■■□□□ 1.37
VPS37A-203ENST00000518038 WDR43Q15061 677 aaKnown RBP eCLIP23.57■■□□□ 1.36
VPS37A-203ENST00000518038 PDZRN3Q9UPQ7 1066 aa23.57■■□□□ 1.36
VPS37A-203ENST00000518038 DLEC1Q9Y238 1755 aa23.56■■□□□ 1.36
VPS37A-203ENST00000518038 EIF2S2P20042 333 aaKnown RBP23.56■■□□□ 1.36
VPS37A-203ENST00000518038 TPTE2Q6XPS3 522 aa23.56■■□□□ 1.36
VPS37A-203ENST00000518038 RGL2O15211 777 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 LMNB1P20700 586 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 PDIA6Q15084 440 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 STYK1Q6J9G0 422 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 ZBTB3Q9H5J0 574 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
VPS37A-203ENST00000518038 ERVV-1B6SEH8 477 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 ANXA1P04083 346 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 MASTLQ96GX5 879 aa23.54■■□□□ 1.36
VPS37A-203ENST00000518038 COL11A2P13942 1736 aaPredicted RBP23.53■■□□□ 1.36
VPS37A-203ENST00000518038 PRPF40BQ6NWY9 871 aaKnown RBP23.53■■□□□ 1.36
VPS37A-203ENST00000518038 LRP10Q7Z4F1 713 aa23.53■■□□□ 1.36
VPS37A-203ENST00000518038 NECTIN2Q92692 538 aa23.53■■□□□ 1.36
VPS37A-203ENST00000518038 CNKSR1Q969H4 720 aa23.53■■□□□ 1.36
VPS37A-203ENST00000518038 RRAGCQ9HB90 399 aa23.53■■□□□ 1.36
VPS37A-203ENST00000518038 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
VPS37A-203ENST00000518038 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
VPS37A-203ENST00000518038 KLRG2A4D1S0 409 aaPredicted RBP23.52■■□□□ 1.36
VPS37A-203ENST00000518038 CHL1O00533 1208 aa23.52■■□□□ 1.36
VPS37A-203ENST00000518038 BABAM1Q9NWV8 329 aa23.52■■□□□ 1.36
VPS37A-203ENST00000518038 GPTP24298 496 aa23.51■■□□□ 1.35
VPS37A-203ENST00000518038 KIF6Q6ZMV9 814 aa23.51■■□□□ 1.35
VPS37A-203ENST00000518038 NUTM1Q86Y26 1132 aa23.51■■□□□ 1.35
VPS37A-203ENST00000518038 SBF1O95248 1867 aa23.5■■□□□ 1.35
VPS37A-203ENST00000518038 TOMM70O94826 608 aa23.5■■□□□ 1.35
VPS37A-203ENST00000518038 HSPA6P17066 643 aa23.5■■□□□ 1.35
VPS37A-203ENST00000518038 C7orf43Q8WVR3 580 aa23.5■■□□□ 1.35
VPS37A-203ENST00000518038 GTF2E1P29083 439 aaPredicted RBP23.49■■□□□ 1.35
VPS37A-203ENST00000518038 ERFEQ4G0M1 354 aa23.49■■□□□ 1.35
VPS37A-203ENST00000518038 CCDC184Q52MB2 194 aa23.49■■□□□ 1.35
VPS37A-203ENST00000518038 SUSD4Q5VX71 490 aa23.49■■□□□ 1.35
VPS37A-203ENST00000518038 UBN2Q6ZU65 1347 aa23.49■■□□□ 1.35
VPS37A-203ENST00000518038 KDM2BQ8NHM5 1336 aa23.49■■□□□ 1.35
VPS37A-203ENST00000518038 NPR1P16066 1061 aa23.48■■□□□ 1.35
VPS37A-203ENST00000518038 OLFM4Q6UX06 510 aa23.48■■□□□ 1.35
VPS37A-203ENST00000518038 ZNF34Q8IZ26 560 aa23.48■■□□□ 1.35
VPS37A-203ENST00000518038 ERBB4Q15303 1308 aa23.48■■□□□ 1.35
VPS37A-203ENST00000518038 SLX4Q8IY92 1834 aa23.47■■□□□ 1.35
VPS37A-203ENST00000518038 ABCC12Q96J65 1359 aa23.47■■□□□ 1.35
VPS37A-203ENST00000518038 APAF1O14727 1248 aa23.46■■□□□ 1.35
VPS37A-203ENST00000518038 GIGYF2Q6Y7W6 1299 aaKnown RBP23.46■■□□□ 1.35
VPS37A-203ENST00000518038 GLTPD2A6NH11 291 aa23.45■■□□□ 1.34
VPS37A-203ENST00000518038 COPS6Q7L5N1 327 aa23.45■■□□□ 1.34
VPS37A-203ENST00000518038 TAOK3Q9H2K8 898 aa23.45■■□□□ 1.34
VPS37A-203ENST00000518038 AIMP1Q12904 312 aaKnown RBP23.44■■□□□ 1.34
VPS37A-203ENST00000518038 NYXQ9GZU5 481 aa23.44■■□□□ 1.34
VPS37A-203ENST00000518038 ZC3H4Q9UPT8 1303 aaKnown RBP23.43■■□□□ 1.34
VPS37A-203ENST00000518038 C3orf67Q6ZVT6 689 aa23.43■■□□□ 1.34
VPS37A-203ENST00000518038 XAGE3Q8WTP9 111 aa23.43■■□□□ 1.34
VPS37A-203ENST00000518038 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
VPS37A-203ENST00000518038 NTSR2O95665 410 aa23.42■■□□□ 1.34
VPS37A-203ENST00000518038 CRY2Q49AN0 593 aa23.42■■□□□ 1.34
VPS37A-203ENST00000518038 C16orf71Q8IYS4 520 aaPredicted RBP23.42■■□□□ 1.34
VPS37A-203ENST00000518038 RBM46Q8TBY0 533 aaKnown RBP23.42■■□□□ 1.34
VPS37A-203ENST00000518038 POTECB2RU33 542 aa23.41■■□□□ 1.34
VPS37A-203ENST00000518038 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
VPS37A-203ENST00000518038 NUP98P52948 1817 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
VPS37A-203ENST00000518038 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 SOGA3Q5TF21 947 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 SLC51AQ86UW1 340 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 DDX21Q9NR30 783 aaKnown RBP eCLIP23.4■■□□□ 1.34
VPS37A-203ENST00000518038 MBIPQ9NS73 344 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 CHPF2Q9P2E5 772 aa23.4■■□□□ 1.34
VPS37A-203ENST00000518038 TNRC6CQ9HCJ0 1690 aaKnown RBP23.39■■□□□ 1.34
VPS37A-203ENST00000518038 ALDH1B1P30837 517 aa23.39■■□□□ 1.33
VPS37A-203ENST00000518038 ZNF428Q96B54 188 aa23.39■■□□□ 1.33
VPS37A-203ENST00000518038 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.33
VPS37A-203ENST00000518038 ZNF853P0CG23 659 aa23.38■■□□□ 1.33
VPS37A-203ENST00000518038 VEGFAP15692 232 aaPredicted RBP23.38■■□□□ 1.33
VPS37A-203ENST00000518038 ZNF277Q9NRM2 450 aaPredicted RBP23.38■■□□□ 1.33
VPS37A-203ENST00000518038 PARP10Q53GL7 1025 aa23.37■■□□□ 1.33
VPS37A-203ENST00000518038 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
VPS37A-203ENST00000518038 DUSP27Q5VZP5 1158 aa23.37■■□□□ 1.33
VPS37A-203ENST00000518038 DPY19L2Q6NUT2 758 aa23.37■■□□□ 1.33
VPS37A-203ENST00000518038 PPP1R42Q7Z4L9 355 aa23.37■■□□□ 1.33
VPS37A-203ENST00000518038 SYNE4Q8N205 404 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms