RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 TESK2Q96S53 571 aa8.58□□□□□ -1.04
PABPC1-204ENST00000517990 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
PABPC1-204ENST00000517990 KIF20BQ96Q89 1820 aa8.58□□□□□ -1.04
PABPC1-204ENST00000517990 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-204ENST00000517990 MAP2P11137 1827 aaKnown RBP8.57□□□□□ -1.04
PABPC1-204ENST00000517990 C10orf71Q711Q0 1435 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 GOLGA8CPA6NN73 597 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 DPEP1P16444 411 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 ITPK1Q13572 414 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 DALRD3Q5D0E6 543 aaKnown RBP8.57□□□□□ -1.04
PABPC1-204ENST00000517990 SMIM5Q71RC9 77 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 JMYQ8N9B5 988 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 WNT2BQ93097 391 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 VPS9D1Q9Y2B5 631 aa8.57□□□□□ -1.04
PABPC1-204ENST00000517990 ERVV-2B6SEH9 535 aa8.56□□□□□ -1.04
PABPC1-204ENST00000517990 PHKG2P15735 406 aa8.56□□□□□ -1.04
PABPC1-204ENST00000517990 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
PABPC1-204ENST00000517990 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
PABPC1-204ENST00000517990 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
PABPC1-204ENST00000517990 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 ZC3H4Q9UPT8 1303 aaKnown RBP8.55□□□□□ -1.04
PABPC1-204ENST00000517990 C4AP0C0L4 1744 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 ARFGEF1Q9Y6D6 1849 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 RPS6KA4O75676 772 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 SLC34A2O95436 690 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 PRELPP51888 382 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 COL13A1Q5TAT6 717 aaPredicted RBP8.55□□□□□ -1.04
PABPC1-204ENST00000517990 EMILIN1Q9Y6C2 1016 aa8.55□□□□□ -1.04
PABPC1-204ENST00000517990 WASHC2AQ641Q2 1341 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 NCAPD2Q15021 1401 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 ZNF831Q5JPB2 1677 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 TNRC6CQ9HCJ0 1690 aaKnown RBP8.54□□□□□ -1.04
PABPC1-204ENST00000517990 GYS1P13807 737 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 CABP4P57796 275 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 DCAF5Q96JK2 942 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 EYA1Q99502 592 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 KCPQ6ZWJ8 1503 aa8.54□□□□□ -1.04
PABPC1-204ENST00000517990 BRCA1P38398 1863 aaKnown RBP8.53□□□□□ -1.04
PABPC1-204ENST00000517990 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
PABPC1-204ENST00000517990 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
PABPC1-204ENST00000517990 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
PABPC1-204ENST00000517990 KIAA1551Q9HCM1 1747 aa8.53□□□□□ -1.04
PABPC1-204ENST00000517990 KDRP35968 1356 aa8.52□□□□□ -1.05
PABPC1-204ENST00000517990 ZPR1O75312 459 aa8.52□□□□□ -1.05
PABPC1-204ENST00000517990 VEGFAP15692 232 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-204ENST00000517990 HTRA3P83110 453 aa8.52□□□□□ -1.05
PABPC1-204ENST00000517990 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.05
PABPC1-204ENST00000517990 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
PABPC1-204ENST00000517990 LMNB1P20700 586 aa8.51□□□□□ -1.05
PABPC1-204ENST00000517990 KCNA3P22001 575 aa8.51□□□□□ -1.05
PABPC1-204ENST00000517990 ANKRD26Q9UPS8 1709 aa8.51□□□□□ -1.05
PABPC1-204ENST00000517990 GLTPD2A6NH11 291 aa8.5□□□□□ -1.05
PABPC1-204ENST00000517990 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 HSPA1AP0DMV8 641 aaKnown RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 HSPA1BP0DMV9 641 aaKnown RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 CRKLP46109 303 aaKnown RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 MTHFSP49914 203 aa8.5□□□□□ -1.05
PABPC1-204ENST00000517990 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
PABPC1-204ENST00000517990 ZNF530Q6P9A1 599 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 USP42Q9H9J4 1324 aaKnown RBP8.5□□□□□ -1.05
PABPC1-204ENST00000517990 SBF1O95248 1867 aa8.49□□□□□ -1.05
PABPC1-204ENST00000517990 EIF4A2Q14240 407 aaKnown RBP8.49□□□□□ -1.05
PABPC1-204ENST00000517990 FKBP8Q14318 412 aa8.49□□□□□ -1.05
PABPC1-204ENST00000517990 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
PABPC1-204ENST00000517990 POLKQ9UBT6 870 aa8.49□□□□□ -1.05
PABPC1-204ENST00000517990 POLRMTO00411 1230 aaKnown RBP8.48□□□□□ -1.05
PABPC1-204ENST00000517990 CHRNA5P30532 468 aa8.48□□□□□ -1.05
PABPC1-204ENST00000517990 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
PABPC1-204ENST00000517990 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
PABPC1-204ENST00000517990 SRP68Q9UHB9 627 aaKnown RBP8.48□□□□□ -1.05
PABPC1-204ENST00000517990 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
PABPC1-204ENST00000517990 MYH14Q7Z406 1995 aaKnown RBP8.48□□□□□ -1.05
PABPC1-204ENST00000517990 C2orf72A6NCS6 295 aa8.47□□□□□ -1.05
PABPC1-204ENST00000517990 H0YIN7 160 aa8.47□□□□□ -1.05
PABPC1-204ENST00000517990 TM4SF1P30408 202 aa8.47□□□□□ -1.05
PABPC1-204ENST00000517990 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-204ENST00000517990 DDR1Q08345 913 aa8.47□□□□□ -1.05
PABPC1-204ENST00000517990 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
PABPC1-204ENST00000517990 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-204ENST00000517990 RASSF7Q02833 373 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 AIDAQ96BJ3 306 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 STK17AQ9UEE5 414 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-204ENST00000517990 PCNTO95613 3336 aa8.46□□□□□ -1.06
PABPC1-204ENST00000517990 KCNC4Q03721 635 aa8.45□□□□□ -1.06
PABPC1-204ENST00000517990 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
PABPC1-204ENST00000517990 C2CD5Q86YS7 1000 aa8.45□□□□□ -1.06
PABPC1-204ENST00000517990 MRPL50Q8N5N7 158 aaKnown RBP8.45□□□□□ -1.06
PABPC1-204ENST00000517990 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
PABPC1-204ENST00000517990 NARFQ9UHQ1 456 aa8.45□□□□□ -1.06
PABPC1-204ENST00000517990 A0A087WZG4 1122 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 NPHP1O15259 732 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 SERPINB2P05120 415 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 NFIXQ14938 502 aa8.44□□□□□ -1.06
PABPC1-204ENST00000517990 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms