RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 EXOC6BQ9Y2D4 811 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 UBR2Q8IWV8 1755 aa13.24□□□□□ -0.29
CPEB4-203ENST00000517880 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
CPEB4-203ENST00000517880 MYL6BP14649 208 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
CPEB4-203ENST00000517880 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
CPEB4-203ENST00000517880 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
CPEB4-203ENST00000517880 COL15A1P39059 1388 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 APBB1O00213 710 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 EXOC5O00471 708 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 SDSP20132 328 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 MX1P20591 662 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 GCKRQ14397 625 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
CPEB4-203ENST00000517880 PHLPP1O60346 1717 aa13.21□□□□□ -0.29
CPEB4-203ENST00000517880 KCPQ6ZWJ8 1503 aa13.21□□□□□ -0.29
CPEB4-203ENST00000517880 IGKV5-2P06315 115 aa13.21□□□□□ -0.3
CPEB4-203ENST00000517880 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.3
CPEB4-203ENST00000517880 LRP6O75581 1613 aa13.21□□□□□ -0.3
CPEB4-203ENST00000517880 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
CPEB4-203ENST00000517880 OTUD7AQ8TE49 926 aaPredicted RBP13.2□□□□□ -0.3
CPEB4-203ENST00000517880 MYD88Q99836 296 aa13.2□□□□□ -0.3
CPEB4-203ENST00000517880 GLI3P10071 1580 aa13.19□□□□□ -0.3
CPEB4-203ENST00000517880 REC8O95072 547 aa13.19□□□□□ -0.3
CPEB4-203ENST00000517880 SNX21Q969T3 373 aa13.19□□□□□ -0.3
CPEB4-203ENST00000517880 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
CPEB4-203ENST00000517880 USP42Q9H9J4 1324 aaKnown RBP13.18□□□□□ -0.3
CPEB4-203ENST00000517880 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
CPEB4-203ENST00000517880 STARD3NLO95772 234 aa13.18□□□□□ -0.3
CPEB4-203ENST00000517880 OS9Q13438 667 aaPredicted RBP13.18□□□□□ -0.3
CPEB4-203ENST00000517880 CLASRPQ8N2M8 674 aaKnown RBP13.18□□□□□ -0.3
CPEB4-203ENST00000517880 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
CPEB4-203ENST00000517880 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
CPEB4-203ENST00000517880 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
CPEB4-203ENST00000517880 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
CPEB4-203ENST00000517880 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
CPEB4-203ENST00000517880 NBPF14Q5TI25 921 aa13.17□□□□□ -0.3
CPEB4-203ENST00000517880 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
CPEB4-203ENST00000517880 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
CPEB4-203ENST00000517880 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
CPEB4-203ENST00000517880 ERC2O15083 957 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
CPEB4-203ENST00000517880 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 PIGBQ92521 554 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
CPEB4-203ENST00000517880 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 SPATA31A1Q5TZJ5 1347 aa13.16□□□□□ -0.3
CPEB4-203ENST00000517880 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 H7C1W4 665 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 KAZALD1Q96I82 304 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
CPEB4-203ENST00000517880 ITGB4P16144 1822 aa13.15□□□□□ -0.31
CPEB4-203ENST00000517880 BCL9O00512 1426 aa13.15□□□□□ -0.31
CPEB4-203ENST00000517880 A0A087WZG4 1122 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 GLRX3O76003 335 aaKnown RBP13.14□□□□□ -0.31
CPEB4-203ENST00000517880 A1BGP04217 495 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 TRIM28Q13263 835 aaKnown RBP13.14□□□□□ -0.31
CPEB4-203ENST00000517880 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
CPEB4-203ENST00000517880 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
CPEB4-203ENST00000517880 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
CPEB4-203ENST00000517880 AFDNP55196 1824 aaKnown RBP13.14□□□□□ -0.31
CPEB4-203ENST00000517880 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 ADAMTS2O95450 1211 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
CPEB4-203ENST00000517880 CASP7P55210 303 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 RABEP1Q15276 862 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 DDB1Q16531 1140 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 NUTM1Q86Y26 1132 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
CPEB4-203ENST00000517880 CHMLP26374 656 aa13.12□□□□□ -0.31
CPEB4-203ENST00000517880 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
CPEB4-203ENST00000517880 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms