RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CLTCL1P53675 1640 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 HOXA2O43364 376 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 GPR37L1O60883 481 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 USP17L8P0C7I0 530 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 KCNA6P17658 529 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 ABL2P42684 1182 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 HLA-CQ95604 372 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 ZFP64Q9NPA5 681 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 STK26Q9P289 416 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 AMOTL2Q9Y2J4 779 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 UBR1Q8IWV7 1749 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 ZFYVE9O95405 1425 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 MED14O60244 1454 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 TMEM131LA2VDJ0 1609 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 SPHKAPQ2M3C7 1700 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 STRCQ7RTU9 1775 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 NUTM2BA6NNL0 878 aaPredicted RBP3.87□□□□□ -1.79
SKP1-204ENST00000517691 NUTM2EB1AL46 878 aaPredicted RBP3.87□□□□□ -1.79
SKP1-204ENST00000517691 GUCA2AQ02747 115 aa3.87□□□□□ -1.79
SKP1-204ENST00000517691 NUTM2AQ8IVF1 878 aaPredicted RBP3.87□□□□□ -1.79
SKP1-204ENST00000517691 BEND7Q8N7W2 519 aaPredicted RBP3.87□□□□□ -1.79
SKP1-204ENST00000517691 SCO2A0A1W2PP80 73 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 UBAP1LF5GYI3 381 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 PPFIA3O75145 1194 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 FDX1P10109 184 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 USP46P62068 366 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 CTDSPL2Q05D32 466 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 CFAP70Q5T0N1 1121 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 TMEM132EQ6IEE7 984 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 ADAMTS19Q8TE59 1207 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 L3MBTL2Q969R5 705 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 TRIM34Q9BYJ4 488 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 HMX1Q9NP08 348 aaPredicted RBP3.86□□□□□ -1.79
SKP1-204ENST00000517691 SPATA31E1Q6ZUB1 1445 aa3.86□□□□□ -1.79
SKP1-204ENST00000517691 NR1I2O75469 434 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 METP08581 1390 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 PIP4K2BP78356 416 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 ARTNQ5T4W7 220 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 ALYREFQ86V81 257 aaKnown RBP3.85□□□□□ -1.79
SKP1-204ENST00000517691 UBE2Q2Q8WVN8 375 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 TONSLQ96HA7 1378 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 NEURL4Q96JN8 1562 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 CALR3Q96L12 384 aaKnown RBP3.85□□□□□ -1.79
SKP1-204ENST00000517691 ZBTB3Q9H5J0 574 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 ENAMQ9NRM1 1142 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 ADAMTS13Q76LX8 1427 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 PPM1GO15355 546 aaPredicted RBP3.85□□□□□ -1.79
SKP1-204ENST00000517691 CAPN5O15484 640 aaPredicted RBP3.85□□□□□ -1.79
SKP1-204ENST00000517691 PAX4O43316 350 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 TOM1O60784 492 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 GLMNQ92990 594 aa3.85□□□□□ -1.79
SKP1-204ENST00000517691 C14orf93Q9H972 538 aaKnown RBP3.85□□□□□ -1.79
SKP1-204ENST00000517691 KDM5AP29375 1690 aaKnown RBP3.84□□□□□ -1.79
SKP1-204ENST00000517691 IQGAP1P46940 1657 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 NEXMIFQ5QGS0 1516 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 TMEM94Q12767 1356 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 UNCXA6NJT0 531 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 CFHP08603 1231 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 BMP1P13497 986 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 ATF3P18847 181 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 MAP3K10Q02779 954 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 SAFB2Q14151 953 aaKnown RBP eCLIP3.84□□□□□ -1.79
SKP1-204ENST00000517691 ZFP42Q96MM3 310 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 POGKQ9P215 609 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 TRAK1Q9UPV9 953 aa3.84□□□□□ -1.79
SKP1-204ENST00000517691 PIK3R4Q99570 1358 aa3.84□□□□□ -1.8
SKP1-204ENST00000517691 KIF1BO60333 1816 aa3.84□□□□□ -1.8
SKP1-204ENST00000517691 POLR1AO95602 1720 aaPredicted RBP3.83□□□□□ -1.8
SKP1-204ENST00000517691 CFAP99D6REC4 459 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 ZBTB24O43167 697 aaPredicted RBP3.83□□□□□ -1.8
SKP1-204ENST00000517691 HDGFL1Q5TGJ6 251 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 WAPLQ7Z5K2 1190 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 PODNQ7Z5L7 613 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 EPS8L1Q8TE68 723 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 FBXO41Q8TF61 875 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 LRRN4Q8WUT4 740 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 CWC22Q9HCG8 908 aaKnown RBP3.83□□□□□ -1.8
SKP1-204ENST00000517691 PRM3Q9NNZ6 103 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 PTPRUQ92729 1446 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 SRPK2P78362 688 aaKnown RBP3.83□□□□□ -1.8
SKP1-204ENST00000517691 FUT2Q10981 343 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 MTMR2Q13614 643 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 NBPF1Q3BBV0 1214 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 WWC1Q8IX03 1113 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 WHAMMQ8TF30 809 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 MRGPRX2Q96LB1 330 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 PRAM1Q96QH2 718 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 C19orf44Q9H6X5 657 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 NDUFB9Q9Y6M9 179 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 CPS1P31327 1500 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 LRRC7Q96NW7 1537 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 MYO5BQ9ULV0 1848 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 PIK3C2GO75747 1445 aa3.83□□□□□ -1.8
SKP1-204ENST00000517691 MSH6P52701 1360 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 LTBP4Q8N2S1 1624 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 ALKQ9UM73 1620 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 CLSPNQ9HAW4 1339 aa3.82□□□□□ -1.8
SKP1-204ENST00000517691 ACTN4O43707 911 aaKnown RBP3.82□□□□□ -1.8
SKP1-204ENST00000517691 SYMPKQ92797 1274 aaKnown RBP3.82□□□□□ -1.8
SKP1-204ENST00000517691 SLAIN2Q9P270 581 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms