RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
MTCL1-204ENST00000517554 TSPYL6Q8N831 410 aa27.43■■□□□ 1.98
MTCL1-204ENST00000517554 CHPF2Q9P2E5 772 aa27.43■■□□□ 1.98
MTCL1-204ENST00000517554 UTRNP46939 3433 aa27.43■■□□□ 1.98
MTCL1-204ENST00000517554 AFDNP55196 1824 aaKnown RBP27.42■■□□□ 1.98
MTCL1-204ENST00000517554 PXDNLA1KZ92 1463 aa27.42■■□□□ 1.98
MTCL1-204ENST00000517554 MAP3K15Q6ZN16 1313 aa27.41■■□□□ 1.98
MTCL1-204ENST00000517554 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
MTCL1-204ENST00000517554 DDX21Q9NR30 783 aaKnown RBP eCLIP27.41■■□□□ 1.98
MTCL1-204ENST00000517554 ERVV-1B6SEH8 477 aa27.39■■□□□ 1.98
MTCL1-204ENST00000517554 RGL2O15211 777 aa27.39■■□□□ 1.98
MTCL1-204ENST00000517554 ZBTB3Q9H5J0 574 aa27.39■■□□□ 1.98
MTCL1-204ENST00000517554 CARMIL3Q8ND23 1372 aa27.39■■□□□ 1.98
MTCL1-204ENST00000517554 A0A0G2JLW4 131 aa27.39■■□□□ 1.97
MTCL1-204ENST00000517554 YBX3P16989 372 aaKnown RBP eCLIP27.39■■□□□ 1.97
MTCL1-204ENST00000517554 TGFB2P61812 414 aa27.39■■□□□ 1.97
MTCL1-204ENST00000517554 SETDB2Q96T68 719 aa27.39■■□□□ 1.97
MTCL1-204ENST00000517554 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
MTCL1-204ENST00000517554 WWC3Q9ULE0 1092 aa27.38■■□□□ 1.97
MTCL1-204ENST00000517554 DPEP1P16444 411 aa27.37■■□□□ 1.97
MTCL1-204ENST00000517554 KCNA3P22001 575 aa27.37■■□□□ 1.97
MTCL1-204ENST00000517554 COPS6Q7L5N1 327 aa27.37■■□□□ 1.97
MTCL1-204ENST00000517554 XAGE3Q8WTP9 111 aa27.37■■□□□ 1.97
MTCL1-204ENST00000517554 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
MTCL1-204ENST00000517554 N4BP2Q86UW6 1770 aaPredicted RBP27.36■■□□□ 1.97
MTCL1-204ENST00000517554 PRR5LQ6MZQ0 368 aa27.36■■□□□ 1.97
MTCL1-204ENST00000517554 KIF6Q6ZMV9 814 aa27.36■■□□□ 1.97
MTCL1-204ENST00000517554 CCDC24Q8N4L8 307 aa27.36■■□□□ 1.97
MTCL1-204ENST00000517554 GPR162Q16538 588 aa27.35■■□□□ 1.97
MTCL1-204ENST00000517554 DBF4Q9UBU7 674 aaPredicted RBP27.35■■□□□ 1.97
MTCL1-204ENST00000517554 NIP7Q9Y221 180 aaKnown RBP eCLIP27.35■■□□□ 1.97
MTCL1-204ENST00000517554 AIMP1Q12904 312 aaKnown RBP27.35■■□□□ 1.97
MTCL1-204ENST00000517554 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
MTCL1-204ENST00000517554 CHRNA5P30532 468 aa27.33■■□□□ 1.97
MTCL1-204ENST00000517554 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.97
MTCL1-204ENST00000517554 NUP98P52948 1817 aa27.33■■□□□ 1.97
MTCL1-204ENST00000517554 ATP10DQ9P241 1426 aa27.32■■□□□ 1.96
MTCL1-204ENST00000517554 DCAF8L1A6NGE4 600 aa27.31■■□□□ 1.96
MTCL1-204ENST00000517554 TWISTNBQ3B726 338 aaPredicted RBP27.31■■□□□ 1.96
MTCL1-204ENST00000517554 UBN2Q6ZU65 1347 aa27.31■■□□□ 1.96
MTCL1-204ENST00000517554 ZNF34Q8IZ26 560 aa27.31■■□□□ 1.96
MTCL1-204ENST00000517554 PHAXQ9H814 394 aaKnown RBP27.31■■□□□ 1.96
MTCL1-204ENST00000517554 GPTP24298 496 aa27.3■■□□□ 1.96
MTCL1-204ENST00000517554 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
MTCL1-204ENST00000517554 CNBD1Q8NA66 436 aa27.3■■□□□ 1.96
MTCL1-204ENST00000517554 HYPKQ9NX55 129 aa27.3■■□□□ 1.96
MTCL1-204ENST00000517554 ANKRD31Q8N7Z5 1873 aa27.29■■□□□ 1.96
MTCL1-204ENST00000517554 FAM177BA6PVY3 158 aa27.29■■□□□ 1.96
MTCL1-204ENST00000517554 NBPF5PQ86XG9 351 aaPredicted RBP27.29■■□□□ 1.96
MTCL1-204ENST00000517554 TCERG1O14776 1098 aaKnown RBP27.28■■□□□ 1.96
MTCL1-204ENST00000517554 GOLGA2Q08379 1002 aa27.27■■□□□ 1.96
MTCL1-204ENST00000517554 CCDC30Q5VVM6 783 aa27.27■■□□□ 1.96
MTCL1-204ENST00000517554 BRIP1Q9BX63 1249 aa27.27■■□□□ 1.96
MTCL1-204ENST00000517554 BRCA1P38398 1863 aaKnown RBP27.27■■□□□ 1.96
MTCL1-204ENST00000517554 VAMP4O75379 141 aa27.26■■□□□ 1.96
MTCL1-204ENST00000517554 SUSD4Q5VX71 490 aa27.26■■□□□ 1.95
MTCL1-204ENST00000517554 MYH16Q9H6N6 1097 aa27.26■■□□□ 1.95
MTCL1-204ENST00000517554 ANKRD13DQ6ZTN6 518 aa27.25■■□□□ 1.95
MTCL1-204ENST00000517554 TPTE2Q6XPS3 522 aa27.24■■□□□ 1.95
MTCL1-204ENST00000517554 PLBD2Q8NHP8 589 aa27.24■■□□□ 1.95
MTCL1-204ENST00000517554 C2CD5Q86YS7 1000 aa27.23■■□□□ 1.95
MTCL1-204ENST00000517554 PIM2Q9P1W9 311 aa27.23■■□□□ 1.95
MTCL1-204ENST00000517554 BCS1LQ9Y276 419 aa27.23■■□□□ 1.95
MTCL1-204ENST00000517554 ST5P78524 1137 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 TCIRG1Q13488 830 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 NUTM1Q86Y26 1132 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 CDCA7LQ96GN5 454 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 ABCC12Q96J65 1359 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 GRIN3BO60391 1043 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 NTSR2O95665 410 aa27.22■■□□□ 1.95
MTCL1-204ENST00000517554 COL11A2P13942 1736 aaPredicted RBP27.21■■□□□ 1.95
MTCL1-204ENST00000517554 NPHP1O15259 732 aa27.21■■□□□ 1.95
MTCL1-204ENST00000517554 PDE6BP35913 854 aa27.21■■□□□ 1.95
MTCL1-204ENST00000517554 SLFN5Q08AF3 891 aa27.21■■□□□ 1.95
MTCL1-204ENST00000517554 G2E3Q7L622 706 aa27.21■■□□□ 1.95
MTCL1-204ENST00000517554 H0YIN7 160 aa27.2■■□□□ 1.94
MTCL1-204ENST00000517554 ERFEQ4G0M1 354 aa27.2■■□□□ 1.94
MTCL1-204ENST00000517554 DLEC1Q9Y238 1755 aa27.2■■□□□ 1.94
MTCL1-204ENST00000517554 IBTKQ9P2D0 1353 aaPredicted RBP27.2■■□□□ 1.94
MTCL1-204ENST00000517554 KLRG2A4D1S0 409 aaPredicted RBP27.19■■□□□ 1.94
MTCL1-204ENST00000517554 NLRP10Q86W26 655 aa27.19■■□□□ 1.94
MTCL1-204ENST00000517554 CHMP4AQ9BY43 222 aa27.19■■□□□ 1.94
MTCL1-204ENST00000517554 ANKRD36CQ5JPF3 1778 aa27.19■■□□□ 1.94
MTCL1-204ENST00000517554 E9PSI1 815 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 SLC4A2P04920 1241 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 PARP10Q53GL7 1025 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 HSP90AB3PQ58FF7 597 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 NYXQ9GZU5 481 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 DALRD3Q5D0E6 543 aaKnown RBP27.18■■□□□ 1.94
MTCL1-204ENST00000517554 ZNF428Q96B54 188 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 ISCA1Q9BUE6 129 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 STK31Q9BXU1 1019 aa27.18■■□□□ 1.94
MTCL1-204ENST00000517554 TNRC6CQ9HCJ0 1690 aaKnown RBP27.17■■□□□ 1.94
MTCL1-204ENST00000517554 SRGNP10124 158 aa27.17■■□□□ 1.94
MTCL1-204ENST00000517554 TRMT2AQ8IZ69 625 aaKnown RBP27.17■■□□□ 1.94
MTCL1-204ENST00000517554 ARFGEF2Q9Y6D5 1785 aa27.17■■□□□ 1.94
MTCL1-204ENST00000517554 ATP5J2-PTCD1G3V325 749 aa27.16■■□□□ 1.94
MTCL1-204ENST00000517554 GTF2E1P29083 439 aaPredicted RBP27.15■■□□□ 1.94
MTCL1-204ENST00000517554 PPP1R42Q7Z4L9 355 aa27.15■■□□□ 1.94
MTCL1-204ENST00000517554 RIC3Q7Z5B4 369 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms