RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 ANO2Q9NQ90 1003 aa8.92□□□□□ -0.98
CPNE3-202ENST00000517391 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
CPNE3-202ENST00000517391 SPINT1O43278 529 aa8.91□□□□□ -0.98
CPNE3-202ENST00000517391 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-202ENST00000517391 PTGIRP43119 386 aa8.91□□□□□ -0.98
CPNE3-202ENST00000517391 MTFR1Q15390 333 aa8.91□□□□□ -0.98
CPNE3-202ENST00000517391 HELQQ8TDG4 1101 aa8.91□□□□□ -0.98
CPNE3-202ENST00000517391 INSM2Q96T92 566 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-202ENST00000517391 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
CPNE3-202ENST00000517391 CHMP3Q9Y3E7 222 aa8.91□□□□□ -0.98
CPNE3-202ENST00000517391 FAM13AO94988 1023 aa8.9□□□□□ -0.98
CPNE3-202ENST00000517391 STAU1O95793 577 aaKnown RBP8.9□□□□□ -0.98
CPNE3-202ENST00000517391 NAA30Q147X3 362 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-202ENST00000517391 LCE3BQ5TA77 95 aa8.9□□□□□ -0.98
CPNE3-202ENST00000517391 CAPN12Q6ZSI9 719 aa8.9□□□□□ -0.98
CPNE3-202ENST00000517391 CHMP7Q8WUX9 453 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-202ENST00000517391 DCTN4Q9UJW0 460 aa8.9□□□□□ -0.98
CPNE3-202ENST00000517391 CDK2AP1O14519 115 aa8.89□□□□□ -0.99
CPNE3-202ENST00000517391 NPR3P17342 541 aa8.89□□□□□ -0.99
CPNE3-202ENST00000517391 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-202ENST00000517391 ZSCAN29Q8IWY8 852 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-202ENST00000517391 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
CPNE3-202ENST00000517391 ARHGEF10LQ9HCE6 1279 aa8.89□□□□□ -0.99
CPNE3-202ENST00000517391 POLMQ9NP87 494 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-202ENST00000517391 ANKRD33BA6NCL7 494 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
CPNE3-202ENST00000517391 ECM1Q16610 540 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 C16orf46Q6P387 395 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 NEDD1Q8NHV4 660 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 CNKSR1Q969H4 720 aa8.88□□□□□ -0.99
CPNE3-202ENST00000517391 C2orf49Q9BVC5 232 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-202ENST00000517391 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
CPNE3-202ENST00000517391 MAPK1P28482 360 aa8.87□□□□□ -0.99
CPNE3-202ENST00000517391 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
CPNE3-202ENST00000517391 NBPF15Q8N660 670 aa8.87□□□□□ -0.99
CPNE3-202ENST00000517391 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 IL2RAP01589 272 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 FURINP09958 794 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 CLN3Q13286 438 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 TLR1Q15399 786 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
CPNE3-202ENST00000517391 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 ASB16Q96NS5 453 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 RAB6BQ9NRW1 208 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 HRH3Q9Y5N1 445 aa8.86□□□□□ -0.99
CPNE3-202ENST00000517391 MEN1O00255 615 aa8.85□□□□□ -0.99
CPNE3-202ENST00000517391 MTMR3Q13615 1198 aa8.85□□□□□ -0.99
CPNE3-202ENST00000517391 GAS6Q14393 721 aa8.85□□□□□ -0.99
CPNE3-202ENST00000517391 COL19A1Q14993 1142 aa8.85□□□□□ -0.99
CPNE3-202ENST00000517391 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
CPNE3-202ENST00000517391 BCRP11274 1271 aa8.84□□□□□ -0.99
CPNE3-202ENST00000517391 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
CPNE3-202ENST00000517391 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
CPNE3-202ENST00000517391 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
CPNE3-202ENST00000517391 NACADO15069 1562 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 CENPCQ03188 943 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 TEAD4Q15561 434 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 TBCELQ5QJ74 424 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 RNF217Q8TC41 542 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 MYO19Q96H55 970 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 CITED4Q96RK1 184 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 STIM2Q9P246 746 aa8.83□□□□□ -1
CPNE3-202ENST00000517391 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
CPNE3-202ENST00000517391 SERTM1A2A2V5 107 aa8.82□□□□□ -1
CPNE3-202ENST00000517391 ZNF16P17020 682 aaPredicted RBP8.82□□□□□ -1
CPNE3-202ENST00000517391 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
CPNE3-202ENST00000517391 HIRAP54198 1017 aaPredicted RBP8.82□□□□□ -1
CPNE3-202ENST00000517391 COX20Q5RI15 118 aa8.82□□□□□ -1
CPNE3-202ENST00000517391 ALYREFQ86V81 257 aaKnown RBP8.82□□□□□ -1
CPNE3-202ENST00000517391 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
CPNE3-202ENST00000517391 MBIPQ9NS73 344 aa8.82□□□□□ -1
CPNE3-202ENST00000517391 NDUFB5O43674 189 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 MPSTP25325 297 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 NOS2P35228 1153 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 RGL4Q8IZJ4 473 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 ABTB2Q8N961 1025 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 GIPC2Q8TF65 315 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 KRTAP4-12Q9BQ66 201 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 RBCK1Q9BYM8 510 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 BCL11AQ9H165 835 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 BRPF3Q9ULD4 1205 aa8.81□□□□□ -1
CPNE3-202ENST00000517391 SENP3-EIF4A1A0A087X0R7 540 aa8.8□□□□□ -1
CPNE3-202ENST00000517391 UNCXA6NJT0 531 aa8.8□□□□□ -1
CPNE3-202ENST00000517391 BTBD11A6QL63 1104 aa8.8□□□□□ -1
CPNE3-202ENST00000517391 BRD2P25440 801 aaKnown RBP8.8□□□□□ -1
CPNE3-202ENST00000517391 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
CPNE3-202ENST00000517391 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
CPNE3-202ENST00000517391 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
CPNE3-202ENST00000517391 FHDC1Q9C0D6 1143 aaPredicted RBP8.8□□□□□ -1
CPNE3-202ENST00000517391 CABP1Q9NZU7 370 aa8.8□□□□□ -1
CPNE3-202ENST00000517391 KRBA1A5PL33 1030 aa8.79□□□□□ -1
CPNE3-202ENST00000517391 EML1O00423 815 aa8.79□□□□□ -1
CPNE3-202ENST00000517391 AAMPQ13685 434 aa8.79□□□□□ -1
CPNE3-202ENST00000517391 LYSMD3Q7Z3D4 306 aa8.79□□□□□ -1
CPNE3-202ENST00000517391 PRICKLE2Q7Z3G6 844 aa8.79□□□□□ -1
CPNE3-202ENST00000517391 NIFKQ9BYG3 293 aaKnown RBP8.79□□□□□ -1
CPNE3-202ENST00000517391 ZNF232Q9UNY5 417 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms